Coregonus clupeaformis (lake whitefish): 121584914
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Entry
121584914 CDS
T08357
Name
(RefSeq) serine/arginine-rich splicing factor 9
KO
K21123
serine/arginine-rich splicing factor 9
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03040
Spliceosome
cclu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121584914
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
121584914
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cclu03041
]
121584914
Spliceosome [BR:
cclu03041
]
Common components
Common spliceosomal components
SR proteins
121584914
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_7
Nup35_RRM_2
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
121584914
NCBI-ProteinID:
XP_041757097
LinkDB
All DBs
Position
16:complement(30839370..30860710)
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AA seq
265 aa
AA seq
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MADGRIYVGNLPADVQERDIEDIFFKYGKIRDIELKNNRGTIPFAFVRFEDPRDAEDAVY
GRNGYGFGDCKLRVEHPRSASSKFNGSMGGSGRGNGEGGPGGPKGRFGPPTRRSEFRVIV
TGLPPTGSWQDLKDHMREAGDVCFTDVQRDGEGVVEFLRREDMEYAVRRLDRTEFRSHQG
ETSSIRVHGEMGASRGRSRSRSRSRSRGRYSPAYQGRGSPPPRYQSPPARRLSRHSPPPR
RPPAAHRSPPSRSPPSRSPPPRHYR
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atggcagatggcaggatctacgtggggaaccttccggctgatgtgcaagagagggacatt
gaggatatattcttcaaatatggcaaaatcagagacattgagttgaagaacaacagaggc
actattccctttgcctttgtgcgctttgaagatccacgggatgccgaggatgcagtctat
gggaggaatggttatggatttggagactgcaagcttcgcgttgagcaccctcgctctgcc
tcctctaaattcaacggttctatgggtggtagtggtcgagggaatggggaaggaggtccc
ggtggtcctaaagggaggtttgggcctcctactcggagatcagagttcagagttattgtg
actggcctgcctccgactgggagctggcaagacttgaaagatcacatgagggaggctgga
gatgtttgtttcacagatgttcagcgggatggggaaggggtggtggagttcctgcgcaga
gaggacatggagtatgccgtgcggcgcctggacaggacagagttcagatcacaccagggg
gagacttcatctatccgggtccatggagagatgggggccagcagaggacgctcgcggtcc
cgttccagatccagatccaggggacggtactcacccgcttatcaaggtcgcggctctcca
ccccctcgttatcagtcgccccctgctcgcagattgtctcgccatagcccccctccacgt
cgtccccctgcagcacaccgtagcccaccaagccgcagcccacccagccgcagcccaccc
ccccgtcactaccgatag
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