Coregonus clupeaformis (lake whitefish): 121584931
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Entry
121584931 CDS
T08357
Symbol
rab11fip3
Name
(RefSeq) rab11 family-interacting protein 3 isoform X1
KO
K12485
Rab11 family-interacting protein 3/4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121584931 (rab11fip3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121584931 (rab11fip3)
Membrane trafficking [BR:
cclu04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
121584931 (rab11fip3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RBD-FIP
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_5
2-thiour_desulf
ZapB
Motif
Other DBs
NCBI-GeneID:
121584931
NCBI-ProteinID:
XP_045076775
LinkDB
All DBs
Position
1:complement(35006016..35058974)
Genome browser
AA seq
1118 aa
AA seq
DB search
MEQTLMSSPQGHSEWDPEGTSSHGFILMDSDKGAIMPQRKGGQTVLDFQKVDQDVSLCLE
ELFQENALNLDSLFRTSSYSGGDKILPWEGDQSNNSQDVPLDKPAELSPLKYKIEEHNNV
SDSPLPGLLFSKTTDLLRDNSACEELNSLQYPPVSVTDPVTCHKELITLSEPPSPVKVSD
RTPSSLLVDHLSSEYFPFSPSPAPSGEVNPQGVSKELLLLSLDEDRGLPPALQGGETVSP
ETGDKGLFLEHVTDLPTVSNITPEGLPESSLSHDAIPTDCASESPAVQVGSVPLLDLEVP
DCDSCLSLCPTHLDSPTCTGAPSPAEDSEQEHTLATAILTLSEHRGEGDSSLLLNSSPSI
EPLSPKFLSNGDASVLGHLPSGCSSEENGPQDLMEDKIIFDFTKHEGEEEMALDQCLTSD
ALPDEEMWDLKPPKAIQGDSVPALQTEQRDGERLADLDLFAGTTDFHKRDSFDCPVLELN
GSSSDSGWTSEQTVETLSLSTMVGSDSMAVVPIVNRREEDPSPLKAVFDALDQDGDGFVR
IEEFMEFAATYGADQVKDLTKFLDPSGLGVISFEDFHRGISAISNGGAEPQLYDVHFSPG
DGAVGCPEEYDEQNEVTDSAYLGSESTYSECETFTDEDTGALVQPEMHEDVETDSGIEAT
LHDPEDSSNRFSLSSELHSHTLVTVIGGEEEHFEDFGESNTSELLLDTTEEGTEGEGDSS
HLQTPDQNNCSSLLLSPSTPTTLPDSFQSFLREEALDFFCNQCHKQISRLEDLSTRLNFL
EMNSSSKRLSSKKVARHLLQNSSLTLDSMSELSRDILDLADTDITDKVLLLERRVAELEK
DSEASGEQHARLRQENLQLVHRANALEEQLKEQELRAEDHLHQETRRHKDALTKLERERG
LELENLQARLQQLDEENSELRSCVPCYRANIERLEEEKRKLEDEVEDVTERLNEELETRR
KTTDKLTHERHQNQKEKEHTQELIEDLRKQLEHLQLYKLEAEARRGRSPSAGLQEYQSRT
REAELEQEIRRLKQDNRSLKEQNDELNGQIINLSIQGAKNLVTASFSESLAAEINSVSRG
ELMEAIRKQEDVNFRLQDYIDRIIVAIMESNPSMLEVK
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atggaacagactctgatgtctagccctcaggggcattccgagtgggatccagaaggcaca
agctcccatggattcatcctcatggattcagacaaaggagccataatgcctcagagaaaa
ggtggtcagacagttttggatttccagaaagttgaccaggatgtatctctatgcctggaa
gagcttttccaggagaacgccttaaatttagacagtcttttcaggacctccagttactct
ggtggagacaagattttgccatgggagggagatcaatctaataattcccaagatgttccc
ctggacaaacctgcagagttatcgcctctcaaatacaaaattgaggaacataacaatgta
agtgacagtcctctacctgggctgttattctccaaaaccactgatttgctcagggataac
tcagcctgcgaggaactaaattccctgcaatatccacctgtgagtgtcacagacccagtt
acctgtcacaaggagctgataaccctcagtgaacctccttcccctgtgaaggtttcagat
aggactccttcctctttgttggtagatcacctctcatctgaatacttccccttctcaccc
agccctgccccttcaggtgaggtgaacccacagggtgtcagtaaggagcttttactcctg
tcactggatgaggacagaggcctccctcctgctttacagggcggggagactgtgtcacct
gaaaccggggacaaaggtttattcctggaacatgtgactgatctgcccacagtcagtaac
attacccctgaaggtttacctgagagcagcctctcacacgacgccatccctactgactgc
gctagcgaatcgccagcggttcaggtgggatctgtgcctttgctggatctggaggttccc
gactgtgacagctgcctcagcctctgccctactcatcttgactcgcctacctgcacaggt
gctccatcacctgcagaggattcagagcaggaacacacattggctactgcaatcctgact
ctctcagagcacagaggtgagggggactcgtccctccttctgaactcttcaccatcgatt
gaaccgctgtcgccaaagttcctctccaacggagatgcttcggtccttggtcacctgccc
agtggctgcagctccgaggagaatggcccccaggatttgatggaagacaaaattatcttt
gatttcaccaaacatgagggagaggaggaaatggctctggatcagtgcttgacctcagat
gcactgcccgatgaggaaatgtgggacttgaaaccacccaaggctatacagggtgacagt
gttcctgctttacaaactgaacagcgcgatggggaaaggttggcagacttggacctgttt
gccggaaccacagattttcacaaacgtgatagttttgattgcccggttctggagttgaat
ggttcgtcttctgactctggatggactagtgaacaaacagtggagacgctgtcactctct
acgatggtggggtctgactccatggctgtggtccccatagtgaatcggagagaggaagac
ccgtcacctctgaaggcagtgtttgacgctctagaccaggatggggatggatttgtacgc
attgaggagtttatggagtttgctgctacctatggggctgaccaggtgaaggatctgacc
aagttcctggatccaagtgggctgggggtgatcagcttcgaggacttccatcgaggaatc
tcggccatcagcaatggaggggcagagccccagctctacgatgtgcacttcagcccaggg
gacggagccgtgggctgcccagaggagtacgatgagcagaatgaagtgacagacagtgcc
tacctgggctcggagagcacttacagcgagtgtgagacgttcaccgacgaggacaccgga
gccctggtccagcccgagatgcacgaggatgtggaaacggacagcggcatcgaggccacg
ctccacgaccctgaggacagcagcaacaggttctccctgagctctgagctgcacagccac
accctggtgacagtgattggcggggaggaggaacactttgaggactttggggagagcaac
acctcggagctgctgctggacaccaccgaggagggaaccgagggagagggggactcgtcc
cacctccagacccccgaccagaacaactgctcctccctgctactctctcccagcaccccc
actactctccctgacagctttcagagcttcctcagggaggaggcactggattttttctgt
aaccaatgtcacaaacaaatctctcgcctggaggacctttccactcgcctcaatttccta
gagatgaatagctccagcaagaggctgtccagcaagaaggtagcacgacacctcctccag
aacagctccctgacgctggacagcatgagcgagctgtcgcgggacatactggacctggcc
gacaccgacatcactgacaaggtgctcctgctggagcgtcgcgtggcggagctggagaag
gactcggaggccagcggcgagcaacacgcgcgcctccgccaggagaacctgcagctggtg
caccgggccaacgccctggaggagcagctcaaggagcaggagctccgcgccgaggaccac
ctgcaccaggagacccgccgccacaaggacgccctcaccaagctggagcgggagaggggc
ctggagctggagaacctgcaggctaggctgcagcagctagatgaggagaacagtgagctg
aggtcctgtgttccctgttaccgcgccaacatcgagagactagaggaggagaagaggaag
ttggaggacgaggtggaggacgtgacggagcggctgaacgaggagctggaaacccggagg
aagactaccgacaagttgacccatgagcgccaccagaaccagaaggaaaaggagcacacg
caggagctgattgaggacctgcggaagcagctggagcacctgcagctgtacaagctggag
gcggaggctaggagagggcgctctcccagcgccgggctgcaggagtaccagagccgcacc
cgcgaggccgagctggagcaggagatccgacgcctcaagcaggacaaccgcagtctgaag
gagcagaacgacgaactgaacggccagatcatcaacctgagcatccagggagccaagaac
ctggtgacggcctccttctccgagtcactggccgccgagatcaactctgtgtcccgggga
gagttgatggaggccatccgcaagcaggaggacgtcaacttccgactacaggactacatc
gaccgcatcatcgtggccatcatggagtccaacccctccatgctggaagtcaagtag
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