Coregonus clupeaformis (lake whitefish): 121584936
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Entry
121584936 CDS
T08357
Name
(RefSeq) repulsive guidance molecule B-like
KO
K06847
RGM domain family member B
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
121584936
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Motif
Pfam:
RGM_C
RGM_N
C8-3_MUC4
Motif
Other DBs
NCBI-GeneID:
121584936
NCBI-ProteinID:
XP_041757135
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Position
16:complement(30293383..30303309)
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AA seq
470 aa
AA seq
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MGRAGCYYRGAESLASLPCVPHLRPLLLLLLALCYGAHRGHCQVATPQCRIQKCTTDFVS
LTSHLTPALDGFDVEFCKALRAYSACTQRTAKSCRGNLVFHSAVLGISDLMTQRNCSRDG
PTSSTHPEIQPEPCNYHSRTQHTHTHPHAHTHPHSHTHTDTQPGYLFCGLFGDPHLRTFK
DSFQTCKVEGAWPLIDNNFLSVQVTNVPVITGSSATATNKITIIFKPFEECTDQRVYQAV
TDDLPAAFVDGTVSSGDPNHNVNGNNGDSTGKVRALWISERSPGHHVELHAGYIGVTVIV
RQLGRYLTLAVRIPEEMAHAYDATQDLQLCLNGCPTSERIDRGGHLPLPLPLPPPALGLH
LQHPQGQGQGQPSHTAPNSAPQRFSVEGARARCREQLELQDIYFHSCVFDLLTTGDANFT
AAAFSALKDMESLHPHRERWRIFPPSSAYTSQPITWLLLLTHFALGSALV
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggggagagccggatgttattaccgcggggctgagagcctcgcatccttgccgtgtgtg
ccccacctgcggccgctgctgctgctgctcctcgctctctgctacggggcgcacagaggt
cattgccaggtggccacccctcagtgtcgtatccagaagtgcaccacagactttgtgtcc
ctgacgtctcacctgaccccagcgctggatggctttgacgtagagttctgtaaggctctg
agggcctacagcgcctgcacccagaggacagccaagtcctgcaggggcaacctggtcttc
cactctgctgtcctgggcatctcagacctcatgacccagagaaactgctcccgtgacggg
cccacctcctccacacaccccgagatacaaccagagccctgcaactaccacagccgtacc
cagcacactcacacacaccctcatgctcatacacaccctcactctcacacacacactgac
acgcagccggggtacctgttctgcgggctgtttggggatccccatttgcggacgtttaag
gacagcttccagacctgcaaggtggagggggcgtggccgctgattgataacaacttcttg
tctgtgcaggtgaccaacgttcctgtgataacgggatccagcgccacagcgaccaataag
ataaccatcatattcaagccctttgaagagtgtacagaccagcgtgtgtaccaggcagta
acagatgacctgcccgctgcctttgtagacggtaccgtgagcagcggagaccccaaccat
aacgttaacggaaataacggtgactctaccggtaaggtacgggcgctgtggatctcggag
cgtagccccggtcaccacgtggagctgcacgccggctacatcggtgtgacggttatcgta
cggcagctggggcgctacctgactctggcggtgcgcatcccggaagagatggcccatgcc
tacgacgctacgcaggacctgcagctctgcctgaacggatgtcccacttcggaacgcatc
gaccggggaggtcacctgcccctgcctctccctctaccacctccagccctgggcttacat
ctccagcatccacaaggccagggccagggtcagccctcacacacagccccaaacagcgcc
ccccagaggttcagtgtggagggtgcacgtgcacgctgcagggagcagctggagttacag
gatatttatttccactcgtgtgtgtttgacctcctgaccactggggacgctaacttcacg
gcagcggcgttcagtgctctgaaggacatggagagtctccaccctcaccgcgaacgctgg
aggatcttcccgccaagctccgcctacacctcccagcctatcacatggctcctactgctc
acacactttgcacttggctctgcactggtatag
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