Coregonus clupeaformis (lake whitefish): 121584948
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Entry
121584948 CDS
T08357
Name
(RefSeq) mesoderm induction early response protein 3
KO
K28171
mesoderm induction early response protein 3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121584948
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
121584948
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GFIT
Motif
Pfam:
MIER1_3_C
ELM2
Myb_DNA-binding
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
121584948
NCBI-ProteinID:
XP_041757149
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Position
16:complement(29795530..29803408)
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AA seq
551 aa
AA seq
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MAEASFGSSSPVGSLSSEDHDFDPTAEMLVHEYDDERTLEEEESLEGEKNFNSEIADLEK
EGNMPLEELLAIYRYEASVSTAAGSSMDSFSGELTDELPDMTLDKEEIAKDLLSGDYEEE
TQSSADDLTPSVTSHEATDFFPRTLRSNTIYDGDKESECEEDGPGPDDSRKEIMVGSQHQ
AEVPTHLCHYGNDKVYEDDDQLLWSPGVLSESKVRDFLCEASLRATDERTGSDMAGAHVS
DNEQALYELVKCNYNTHEALERYCSNVNSSKEKSPLWSEDECRNFEHALQIYDKNFHLIQ
KHKVKTRTVAECVAFYYMWKKSERFDFFVQQNRFGKKKYSSYPGITDLMDRLVDEAEGLA
VDSSSSVCSGGGGGVRMEPTTEQQLSLLDSITASDLTALSNSVATVCSPAEVSCLDSYSF
PPLESLHRGSLAQDEPLGFPSNGGDPDCLNMLDTGFYHSDLGQRGGVYGGKDCERPSKRL
KLTLPDSFINDVSVGNLGVDFEGRRNTAHHRITGAKMAVSVTDFGSLAGSGEPNGFMGAH
ARHHSTVLQSE
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcttccttcgggagttcgagcccagttggctctttatcgtctgaagatcat
gacttcgatccgacagcagagatgctagtccacgaatatgacgacgagaggactttggag
gaggaagagtcattggagggcgagaaaaactttaactcagagatagccgatctagagaag
gaggggaacatgccgttggaggaactgctggccatctaccgctacgaggcgtctgtcagt
acggctgcaggctccagtatggacagcttttctggggagctgacggatgagctgccagac
atgactttggacaaagaggagatagctaaagacctgctatcaggggactatgaggaggag
acccagtcctctgctgatgacctcaccccttcagtcacctcccatgaggccaccgacttc
ttccccagaacactcagatctaacactatctacgacggtgataaggagtccgagtgtgag
gaagatgggccaggcccagacgactccagaaaagaaataatggtgggttcgcagcaccaa
gcagaggtccccacccacctctgtcactatggcaatgataaggtatacgaagatgatgac
cagttgctatggagcccaggcgtgttgtcagagagcaaggtcagggacttcctgtgtgag
gcgtcgttacgggcgaccgatgagaggacaggaagtgacatggcaggggctcatgtgagc
gacaatgagcaggctctgtatgagcttgtgaaatgcaactacaatacccacgaagcactg
gagaggtattgcagtaatgtgaactcatcaaaggagaaatccccactgtggtctgaagat
gaatgcagaaactttgaacatgcactacagatatatgataagaactttcacctcatacag
aaacacaaggttaagacacggacggtagctgaatgtgtggctttctactacatgtggaag
aagtcggagcgctttgatttctttgtccagcagaatcgctttggcaagaagaagtatagc
agctatcctggcataacggacctgatggaccggctggtggacgaggcagaaggcctggca
gtagacagctcctcctctgtgtgctcaggtgggggaggaggggtgaggatggagcccacc
acagagcagcagctcagcctgctcgactccatcactgccagcgacctcacagccctgagt
aacagcgtggccacagtgtgcagcccagcggaggtgagctgcctggactcgtacagtttc
ccccctctggagagcctccaccgagggtccctggcccaggacgagcccctgggcttcccc
tccaacggaggagatcccgactgtctcaacatgctggacaccggcttctaccactctgac
ctgggccagcggggaggggtgtacgggggcaaggactgcgagcggccttctaagaggctc
aagttgacgctgcccgactctttcatcaacgacgtttccgtgggtaacctcggagtggac
tttgaggggcggcggaacacggcgcaccaccgcatcactggcgccaagatggctgtgtcc
gtcacagactttgggagcttggcgggcagtggggagcccaatgggtttatgggagcacat
gcacgacatcacagcacggtgctccagtcagagtga
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