Coregonus clupeaformis (lake whitefish): 121584961
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Entry
121584961 CDS
T08357
Name
(RefSeq) protein KATNIP homolog
KO
K22858
protein JBTS26
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cclu03037
]
121584961
Cilium and associated proteins [BR:
cclu03037
]
Other cilia and associated proteins
Other cilium assembly proteins
121584961
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4457
Motif
Other DBs
NCBI-GeneID:
121584961
NCBI-ProteinID:
XP_041757176
LinkDB
All DBs
Position
1:complement(36262142..36297261)
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AA seq
1713 aa
AA seq
DB search
MDKAENQRSQGGLAAEEILDEYLIALQHKNRILKRLKTKEPKEIELERLEQGFSIYLNGA
NASKLTKRPNQKSATSPPPALRATHTADASRRGLQLAEEEIHNLEVNSSKRSHTAPGKVQ
RREWVQKSVNIQTEQGPCLRISPERRYSEDFEPYDSIEMERSSPRSPRSPLRNSCKVSCS
FGSRADGRGGSQAEPEHKNERVLLNIDEVKVLRRSLEVSVRRSSGSRGSAGEESDEEWVE
EQIEREESTESLEELGLPPSSSNKTSTNMNHPRATGPKGCLHDPAELMVLDFGPSPKGQK
IERSLSAKRKDNMEAYVPTKPLLVKSKTLDRPSSKECRDGRDPQRPRSRVERPLSAARKV
SQEERDSEETACRVLQALQIENSPLQSPEPRAFSRTPVRGHQMMNGSLRDDDDDKESGVT
RAMQRITLMGPRQQQRLLKALEKLEAGTNFDIPQTVKTDKSKPPKRRVSAEAPPTVYVTM
EILSNWGNRGQVGLTEMQFFGPGNRKLYVSPHDLDIRNADYPGNLGALVNGKAKTTKERH
MWTCPFHPPVQLYFIIRNTERSPDFEISRIKIWNYNKSINLLLPPALLLSQRGRTGAQSP
GNQGSVWNYGCYGLILTVSLFIESFVRYWWCVLSCEDLDIGARHVNLYLNSTLVFEGELD
KGCGNQVFDYSTSIALQALQVPESFSPSPVVSGHILCGASPQRHYDRNMEGNSGGHHCDP
NPNHGLTLSEGLAQVRIDLQDKTYNPLSPIAPTSTHRLLQRNSIDMDPPELDLPHPPLKQ
QLEQSGQPTECTVTTQPSSSRTPQWLQPMSRSAPEGCEAAREKPLWLVPQQSVESKPSLP
QSSSTSTSVLPELGCNPGRVCRGVERTVNEGQASADSLDLGGDLLEELSDQQRQDQPVSG
RRSSARHNNTSTTSSKPAVEHQHGAIGLSIEEPGSDSSNRRQQRTPRAQLRSQQDHDDTL
MESWDSLTKFNQCQRGRISNMSFEGDIFDEFLQRSSRAATIAIIPSSGPGASPCSPIPHS
SHLSSPAPQGGLCDDPEDDLSAEAEREEEFEIPVLPRGQRLVIKILSTWGDRHYVGLNGL
EVFSSSGQPLLPTRIRADPPDINVLPAYGKDPRVVTNLIDGVNLTQDDMHLWLAPFTQGR
SHVIYLEFAGLCQVAMIRVWNYNKSRIHSFRGVKEAEMLLDGRCIFRGEIAKASGTLSGP
VRDTILFTTDDEILEAMSRYDETFCGEAKGSEGLVGYEEELQRPRTADGEGEERPFTQAG
FRPEDDLTLNLHLNPTVGQSEETLEQIPGMYNGKCLRIELSMTWGDSHYLGMTGLEVVGK
EGDSLPLDLTMVNASPRDLNDLPEYGQDTRTLDKLIDGHNITTEDQHMWLIPFFCGQHHT
LTVNFDKAQTVAGLRIWNYNKTPEDSYRGVKVIHVSLDDTLISPAEGFLIRKGPGNCHFD
FAQEILFIDFLQNPTTGLVNSKTTSEDLVYTLKAGSKRQEQPSMDYEAPIMPCGFIFQLQ
LLTTWGDPYYIGMNGLEFYDQNDEKIPLSDNNIAAFPDSVNVLDSVNGDIRTPDKLVDGV
NNTHDGRHMWLAPVLPGLVNRVYLIFDQPVTVSMIKLWNYSKTPQRGVKEFGLLVDDLLV
YNGILDSVSQAARGILPTCDPVVPYHTILFTDNACIAHRERNTVISNYVEDQDVKMTNEN
QIVHHNKKKQTADPALRPKTCMTDTGKLGKRRY
NT seq
5142 nt
NT seq
+upstream
nt +downstream
nt
atggataaagcggagaaccagaggagtcagggaggcttggctgccgaagagatactggat
gaatatttaatcgcccttcagcacaaaaacaggatcttaaagagactgaaaacgaaagag
cccaaggagatcgagctagagcgtctggagcagggcttctccatctatctgaatggcgct
aacgctagcaagctgaccaagagacccaaccagaagtctgccacctcgccaccgccggct
ctgagagctacacacacggctgatgcctccagaaggggtttgcagctagcagaggaggag
atccacaatctggaggtgaacagtagcaagaggagtcacaccgccccgggaaaagtgcag
aggagagaatgggttcagaagtcggtcaatattcaaacagaacaaggaccctgtttgcgg
atatctccagagagacggtactctgaagactttgaaccctacgacagcatagagatggag
cggtcgagtccacgttctcctcgtagccccctgcgaaactcctgtaaggtgtcatgttcg
tttggctccagggctgatggccgaggaggtagccaggcggagcctgaacataaaaacgaa
cgggtcctactgaacatcgacgaggtcaaggtgcttcgacggagcctggaggtgagcgtg
cggaggagcagtggcagccgggggtcggcgggggaggagtcggacgaggagtgggtggag
gagcagatagagagggaggagagcacggagagcctggaggagctaggcctgcctccttcc
tcctccaacaaaacatctactaacatgaaccatccgcgagccactgggcccaaaggctgc
cttcacgaccctgcagagctcatggtgctggactttgggccctctcctaaaggccagaag
atcgagcgttcgttgtcagccaagcggaaagacaacatggaagcctacgtccccaccaag
cctctgctggtgaagagcaaaactctggacaggccctcttcaaaggagtgcagggatggc
agagatcctcaacggccgaggagtcgtgtagagcgccccctgtctgcagcgaggaaggtc
tcccaagaggagcgcgactcagaggagacggcgtgcagggtgctccaagccctgcagata
gagaacagcccactgcagagccccgagcccagggccttcagccgcaccccggtgagagga
caccagatgatgaacggctcgctgcgtgacgacgatgacgacaaggaaagtggggtgacc
agagccatgcagagaatcaccctgatgggacccaggcaacagcagagactactaaaggcg
ttggagaaactggaggcaggcacaaactttgacatccctcagacagtgaaaacggacaaa
agcaaaccaccgaagaggcgggtctcggccgaggcaccgcccaccgtatacgtcaccatg
gagatcctaagtaactgggggaacaggggccaggtggggctgacggagatgcagttcttc
ggcccagggaacaggaagctgtacgtgtcgccacacgacctggacatccggaacgccgac
taccctgggaacctcggagcgctggtcaacgggaaagctaaaaccacgaaggagcgtcat
atgtggacctgtcctttccatcctccggtccagctctacttcatcattaggaacacggag
cgctctccggactttgagatatcccggatcaagatctggaactacaacaagagcatcaat
ctgctcctgcctcccgccctgctgctgtcacaaaggggacggacgggggcacaaagccca
ggcaaccagggatctgtctggaactatggatgttatgggttgatattaaccgtgtctctg
ttcattgagtcctttgttaggtattggtggtgtgttttaagctgcgaggacctggacatt
ggcgcccggcatgtgaatctttacctcaacagcacgctggtgttcgaaggcgagctggac
aagggctgtggcaaccaggtcttcgactacagcaccagcattgccctccaggcactccaa
gtcccagaatccttctctcccagccccgtggtgtccggacacattctctgtggcgccagc
ccacagcgccattatgacaggaacatggaggggaacagcggagggcaccattgtgacccc
aaccccaaccacggactcactctctctgaggggctggcccaggtcagaatagacttgcag
gataaaacctacaaccccctctcccccatcgcccccacatctacacaccgtctcctacag
aggaactccattgacatggaccctccggaactggaccttccccacccccctctgaaacag
cagctggagcagtcgggtcaacccacagagtgcacagtcaccacgcagccttcctcctcc
aggactccccagtggctacaacccatgtcccggagcgccccagagggctgcgaggctgcg
agggagaagcccctctggctagtgccccagcaatctgtggagtccaaaccttccctccca
caatcctcctccacctccacctcagtgctcccagagctgggctgtaacccagggagggtg
tgtcgtggggtggagaggacggtgaacgagggccaggcgagtgcagactctctggacctg
ggaggtgacctgctggaggagctgagtgaccagcagcgccaggaccaacctgttagtgga
cgtaggagctcagccaggcataataacactagtactaccagcagcaaaccagcagtggag
caccagcatggagccattggactgtccatagaggagccaggttcagacagcagcaaccgg
aggcagcagcgtaccccccgggcccagctccgcagccagcaggaccatgacgacaccctc
atggagtcctgggactccctcaccaagttcaaccagtgccagcgtggtcgcatctccaac
atgagctttgagggtgacatctttgacgagttcctccagcgttcctccagagccgccact
attgccataatcccctcctccggcccaggagcctccccctgcagccccatcccccactcc
tcccacctctcctcccccgcccctcaagggggcctctgcgatgacccagaggatgacctt
tccgccgaggcggagcgcgaggaggagtttgagattccggtcctcccacgtggtcaacgt
ctggtcattaaaatcctgtccacgtggggcgatcgccactatgtgggcctcaacggtctc
gaagtcttcagctccagcggtcagcccctccttcccacccgaatccgcgccgacccgcct
gatatcaacgtgctgcctgcctacggaaaggacccgcgtgtggtcaccaacctgatcgat
ggcgtcaacctcacacaggacgacatgcacctgtggctggcacctttcacccaggggagg
agtcacgtgatctacctggagttcgccgggctgtgtcaggtggccatgataagagtgtgg
aactacaacaagtccaggatccactcgttcaggggggtgaaggaagctgaaatgctgctg
gatgggaggtgcatcttcaggggagagatcgccaaggcgtcagggactctgtctggacca
gttcgggacaccatcttgttcaccacggacgatgagatcctggaggccatgtcgcgctat
gacgagacgttctgcggggaggcaaagggctccgaggggctggtggggtatgaggaggag
ctgcagaggccccgcacggccgacggagagggggaggagagacctttcacccaggctggc
ttcagacccgaggacgacctcactttaaacctccatctgaaccctactgttggtcagtct
gaggagaccctggagcagatcccaggaatgtacaatggaaaatgccttaggatagagttg
agtatgacgtggggggactcccactacctgggcatgacggggttagaggtggtggggaag
gagggggacagcctgcctctggacctgaccatggtgaacgcctcgccacgggacctcaac
gacctgcctgagtacggccaggacacacgcaccctcgacaaactcattgacggccacaac
atcaccactgaggaccagcacatgtggctgatcccatttttctgtggccagcaccacacc
ctgacagtgaactttgacaaggcacagacagtggctggcctccgcatctggaactacaac
aagaccccagaggactcctacagaggggtaaaggtgatccatgtgtctctggacgataca
ctcatctctccagcagagggcttcctcatcaggaagggaccagggaactgtcactttgac
tttgctcaggagatcctcttcatcgacttccttcagaaccccaccactggcctggtcaac
agcaagactacatcagaggacctggtctatacactcaaagctggttccaaaagacaggag
cagcccagcatggactatgaggcccccatcatgccttgtggattcatcttccagctgcag
ctgctgaccacctggggtgatccctactacatcggcatgaacggcctggagttctatgac
cagaacgacgagaagatccccctcagtgacaacaatatcgctgcgttcccagacagtgtg
aatgtcctggacagtgtaaacggtgatataaggactccagataagctggtagatggagtg
aacaacactcatgatggcagacacatgtggctagcaccggtgctccccggactggtgaat
cgcgtgtatcttatatttgaccagccagtgaccgtgtccatgatcaaactgtggaactac
tccaagacaccacagaggggggtaaaggagtttgggctgttagtcgatgatcttctggtg
tataatggcatcttggacagcgtgagccaggcggcgcggggcatcctgcccacctgtgac
ccggtggtgccctaccacaccatcctcttcaccgacaacgcctgcatcgcccaccgtgaa
aggaacactgtaatcagtaactatgtggaggaccaagatgtgaagatgaccaatgagaat
cagatagtccatcacaacaagaagaaacaaacagctgatccagcgcttcggcctaaaacc
tgcatgacggacactggaaagctggggaaaaggaggtactga
DBGET
integrated database retrieval system