Coregonus clupeaformis (lake whitefish): 121584982
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Entry
121584982 CDS
T08357
Name
(RefSeq) clathrin heavy chain 1-like isoform X1
KO
K04646
clathrin heavy chain
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04142
Lysosome
cclu04144
Endocytosis
cclu05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121584982
04142 Lysosome
121584982
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
121584982
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121584982
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121584982
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
121584982
Exosome [BR:
cclu04147
]
Exosomal proteins
Proteins found in most exosomes
121584982
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_PEP5_VPS11
TPR_Vps41
IFS
Gp18_dom_I
capSnatchArena
Motif
Other DBs
NCBI-GeneID:
121584982
NCBI-ProteinID:
XP_041757203
LinkDB
All DBs
Position
16:44216514..44251506
Genome browser
AA seq
1685 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGVNLANIGFSYLTMESDKFICIREKVGEQNQVVIIDMADPNN
PSRRPISADSAIMNPASKVIALKEDAAKCLQIFNIEMKSKMKAHTMTEEVMFWKWISVNT
VALVTEVAVYHWSMEGDSQPIKVFDRHASLAGCQIINYRADEQQKWLLLIGISAQQNRVV
GAMQLYSVDRKVSQPIEGHAAAFGEFKVEGNTKASTLFCFAVRSQAGGKLHIIEVGQPAT
GNQPFTKKAVDVFFPPEAQTDFPVAMQIGTKHGVIYLITKYGYIHLYDLESGVCIYMNRI
SAETIFVTAPHELTSGIIGVNKKGQVLSVCVEEENIVNYATNVLQNPDLGLRMAVRSNLA
GAEELFARKFNTLFAQGSYSEAAKVAASSPKGILRTAETIRKFQSVTAQPGQASPLLQYF
GILLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKAVDPTLALSV
YLRANVPSKVIQCFAETGQFQKIVLYAKKVGYSPDWVFLLRNVMRVSPDQGLQFSQMLVA
DEEPLANINQIVDVFMEGSLIQQCTSFLLDALKNNQPAEGHLQTRLLEMNLIHAPQVADA
ILGNQMFSHYDRAHIAQLCEKAGLLQRALEHYTDLFDIKRAVVHTHLLNPEWLVNFFGAL
SVEDSVECLRAMLSANIRQNLQLCVQVASKYHEQLGTNALVELFESFKSYEGLFYFLGSI
VNFSQDPDVHFKYIQAACKTGQIKEVERICRESNCYDPDRVKNFLKEAKLTDQLPLIIVC
DRFDFVHDLVLYLYRNTLQKYIEIYVQKVNPSRLPVVIGGLLDVDCAEDIIKNLIMVVRG
QFSTDELVAEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNTPERFLKENT
FYDSAVVGRYCEKRDPHLACVAYERGQCDMDLIKVCNENSLFKSEARYLVRRKDPELWAN
VLEENNPYRRQLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSIF
SEHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFKKFDVN
TSAIQVLIEHISNLDRAYEFAEHCNEAAVWSQLARAQLQRDLVKEAIDSYIKADDPSAYM
EVVSAASKNNNWEDLVKFLQLARKKARESYVETELIFALAKTGRLAELEEFVSGPNNAHI
QQVGDRCYEEGMYDAAKLLYNNVSNFARLASTLVHLGEYQAAVDSARKANSTRTWKEVCC
ACVDGEEFRLAQICGLHIVIHADELEELISYYQDRGYYEELIALLEAALGLERAHMGMFT
ELAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQSHLWAELVFLYDKYEEYDNAVLTM
MSHPTEAWKEVQFQDIIAKVANVELYYKSLSFYLDYKPLLTNSLLTILSPRLDHSRTVTY
FTKVNQLKLVKPYLRSVQSHNNKGVNEALNNLLTEEEDYQGLRASIDAYDNFDTIGLAQR
LEKHELIEFRRIAAYLYKGNNRWRQSVELCKKDKLYKDAMLYAAESNDAELAETLLQWFL
EEGRKECFAACLFASYDLLHPDVVLELAWRHNIMDFAMPYFIQVMREYLTKVDEVAEKVT
VDKLEESESQRKTEEEVTEPTPIVFGQQLMLTAGSAPVAPQPGYPGGYGYAAPGYSPQPP
YSYNM
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatactgccgatacgatttcaggaacatctgcagctgcagaacctgggggtg
aacctggctaacattggtttcagctacctgaccatggagtctgacaagttcatctgcatc
cgggagaaggtgggcgagcagaaccaggtggtgatcatagacatggccgaccccaataat
cccagcagacgtcccatctccgctgacagtgctatcatgaaccctgccagcaaggtcatc
gccctcaaagaggacgctgctaagtgcctgcagatcttcaacattgagatgaagagtaag
atgaaggcccacaccatgactgaggaagtcatgttctggaagtggatctctgtcaacact
gtcgccttggtgactgaagtggctgtctaccattggagcatggagggggactcgcagcca
atcaaagtgtttgatcgtcacgctagtctggccggatgccagatcataaactacagagca
gacgaacagcagaagtggctcctccttatagggatctcagcacagcaaaaccgtgtggtg
ggggccatgcagctgtactctgtggacaggaaggtgtcccagcccatcgagggccacgct
gcagccttcggagagtttaaggtggagggcaacaccaaagcctccactctcttctgcttc
gctgtgcgcagccaggctgggggcaagctgcacatcatagaggtgggacagccggctaca
gggaaccagccatttactaagaaggcggttgacgtgttcttccctcctgaggctcagaca
gacttccctgtcgccatgcagattggcaccaagcacggtgtgatctacttgatcactaag
tatggctacatccacctgtatgacctggagtcaggagtgtgtatctacatgaaccgcatc
agcgcagagaccatcttcgtcaccgccccccacgaactcacctccggcatcatcggggtt
aacaagaagggacaggtgttgtcagtgtgtgtggaggaggagaacatagtgaactatgcc
accaatgtgctacagaacccagacctgggcctgaggatggccgtgcgttctaacctggcc
ggggctgaggagctgtttgccaggaagttcaacacactgttcgcccagggctcctactcc
gaggctgccaaggtggccgcatcctcacccaagggtatcctgcggacagcggagaccatc
cgtaagttccagagtgtgacagcccagccgggccaggcttctcccctgctgcagtacttt
ggcatcctgctggaccagggccagctcaacaagtttgagtctctggagctgtgcaggccc
gtgctacagcagggacgcaagcagctgctggagaagtggctgaaagaggacaagctggag
tgttctgaggagcttggtgacctggttaaggcagtagatcctactctagccctcagtgtc
tacctcagggccaacgtacccagcaaggtgatccagtgctttgctgagaccggacagttc
cagaagatagtgctctacgccaagaaggtgggctactctccagactgggtgtttctgttg
aggaatgtgatgcgggtcagtccagaccagggtctacagttctctcaaatgctggtcgca
gatgaggagcccctggccaacatcaaccagatagtggatgtgttcatggagggaagtctg
attcagcagtgtacctccttcctattggacgctctgaagaacaaccagccagccgaggga
cacctacagacacgcctactggagatgaacctcatccatgccccccaggttgccgatgca
atccttggcaaccagatgtttagtcactatgaccgtgcccacatcgcccagctgtgtgag
aaggctgggctactacagagggctctagaacactacactgacctgttcgacatcaaacgg
gctgtcgtacacactcacctgctcaaccctgagtggctggtgaacttctttggcgccctg
tcagtagaggactcagtagagtgtcttcgggccatgttgtcagccaacatcagacagaac
cttcagctgtgtgtccaggtggcatctaaataccacgagcagctgggaacaaacgccctg
gtggagctctttgagtccttcaagagctacgagggtctgttctacttcctgggctccata
gtgaacttcagccaggaccctgacgtccattttaaatacatccaggcggcctgtaagaca
gggcagatcaaggaagtggagcgcatatgtagagagagcaactgttacgacccggacagg
gtcaagaacttcctcaaggaggctaaattgacagaccagctgcctttgatcattgtgtgt
gaccgctttgactttgtccatgacctggtgctctatctctaccgcaacactctgcagaag
tacatagagatctacgttcagaaggtgaaccccagccgtctgcctgtggtgataggaggt
ctgttggatgtagactgtgctgaagacatcattaagaacctgatcatggtggtgagagga
cagttctccactgatgagctggtggcagaggtggagaagaggaacagattgaaactgttg
ttgccgtggcttgagtctcgtatccacgagggctgtgaggagccagctacccataatgcc
ttggctaagatctacattgacagtaacaacaccccggagcgcttcttgaaggagaacacc
ttctacgacagcgctgtagtggggaggtattgtgagaagagagatccccacctcgcctgt
gtcgcctatgagaggggccagtgtgacatggaccttatcaaggtgtgcaatgagaactcc
ctgttcaagagtgaggctcgctacctggtccgacggaaagacccagaactatgggccaac
gttctagaggagaacaacccttatagacgccaactcatagaccaggtggtgcagacagct
ctgtcagagacccaggacccagaggaggtgtctgtgacggtcaaggcctttatgacagct
gacctgcccaatgagctcatcgaactactggagaagatcgtactggacaactcaatcttc
agcgagcatcgaaacctccagaacctgctgatcctgacggccatcaaggcagaccggacg
cgtgtgatggagtacatcaaccgcctggacaactacgacgccccagacattgctaacatc
gccatcagtaacgagctcttcgaggaggccttcgccatcttcaagaagtttgacgtcaac
acctccgccattcaggtcctgatcgagcatatcagtaacctggacagagcctatgagttt
gcagagcattgcaatgaggctgcagtatggagtcagctggccagagcccagctccagaga
gaccttgttaaagaggccattgactcctacatcaaagctgatgacccgtcagcctacatg
gaggtggtcagcgctgccagcaagaacaataactgggaggacctggtgaagttccttcag
ttggctcgtaagaaggccagagagtcgtatgtagagacagagctcatctttgctctggct
aaaactggtagactggccgaattagaggaatttgtcagcggccctaacaacgcccatata
caacaggtgggagataggtgttatgaagaagggatgtacgatgctgccaagctgctgtat
aataacgtgtccaactttgcccgcctggcatccacgctggtacacctaggagagtaccaa
gctgctgtggacagcgccaggaaagccaacagcacacgcacctggaaggaggtgtgttgt
gcgtgtgtggatggggaagagtttcgattggctcagatctgtggtctacacattgtcatc
cacgctgatgaactggaggagctcatcagttactatcaggaccggggctactatgaggag
ctgatagccctgttggaggccgcgttgggtttggagcgcgctcacatgggcatgttcaca
gagctggccatcctctactccaaatttaaaccccagaagatgagagaacaccttgaactc
ttctggtcccgcgttaacatccctaaggtgctgcgagcggcagagcagtcccacctgtgg
gcggagttagtgtttctgtatgataaatacgaggaatatgacaacgctgtcctcacgatg
atgtcacatcctactgaggcatggaaggaggtgcagttccaggacatcattgccaaggtg
gccaatgtggagctgtactacaaatccctttccttttacctggactacaaacctctgctg
acgaacagccttctgaccatactgtcaccacggttagaccacagccgcacggtcacctac
ttcaccaaggtgaaccagttgaagttggtaaagccttacctgaggtcagtccagagtcat
aacaacaagggagtcaacgaggccctcaataacctactgacagaggaggaggattaccag
ggtctgagggcgtctatcgatgcatatgataactttgacaccattggtctggcccagaga
ctggagaagcatgaactgattgagttcagacgcatcgcagcatacctctacaaaggtaac
aaccgctggagacagagcgtggaactctgcaagaaggacaaattatacaaggatgcaatg
ctgtacgctgctgagtctaacgatgctgagctggctgagaccctgctgcagtggtttttg
gaggagggaaggaaggagtgtttcgctgcctgtctgtttgcctcctacgacctgttgcac
cctgatgtggtgctggagctggcctggagacacaacatcatggactttgccatgccatac
ttcatccaagtcatgagggagtacctcaccaaggttgatgaggttgcggagaaggtgacg
gtggacaaactggaggagtcagaaagccaaaggaagacagaggaagaagttacagaaccc
actcccatagttttcggtcagcagctgatgttgacggcaggctctgctccagtggctccc
cagccaggatacccaggaggctacggatacgctgccccaggctactccccccagcccccc
tacagctacaacatgtag
DBGET
integrated database retrieval system
