Coregonus clupeaformis (lake whitefish): 121585033
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Entry
121585033 CDS
T08357
Name
(RefSeq) nucleolysin TIA-1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121585033
03041 Spliceosome [BR:
cclu03041
]
121585033
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
121585033
Spliceosome [BR:
cclu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
121585033
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Calcipressin
RRM_Nup35
XOO_2897-deam
Motif
Other DBs
NCBI-GeneID:
121585033
NCBI-ProteinID:
XP_041757298
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All DBs
Position
16:complement(48085351..48103739)
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AA seq
390 aa
AA seq
DB search
MMMMDDEQPKTLYVGNLSRDVTEPLILQVFTQIGPCKSCKMIVDTAGNDPYCFVEFYEHR
HAAASLAAMNGRKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTDDVKAAFGP
FGRISDARVVKDVATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPA
PKTTYETNTKHLSFDEVVNQSSPSNCTVYCGGVGTGLTEQLMRQTFSPFGQIMEIRVFPD
KGYSFVRFNSHEGAAHAIVSVNGTSIEGHMVKCYWGKETPDMMSPMQQVQQVPQNKVGFA
AQPYGQYAQWYGNAQQIGQYVPNGWQVPTYGVYGQAQAWNQQGFNHLPASAGWTGVSALS
NGGVMEATQGLNGSMLANQAGMGATGYPTH
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatggacgacgaacagcccaaaaccctgtatgtagggaacctgtccagggat
gtcactgagcccctcatcctacaggttttcacacagatcggcccctgcaagagctgtaaa
atgattgttgatactgcaggcaatgacccatactgctttgtggagttctatgaacacagg
catgctgccgcgtcactggctgccatgaatggacgtaaaattatgggtaaggaggttaaa
gtcaactgggccacaacgccaagcagtcagaaaaaagacacaagcaatcatttccatgtc
tttgtcggagacctcagccccgaaatcaccacagacgatgtaaaagcggcctttggtcca
tttgggaggatatcggatgctcgtgtagtcaaagatgtggcgacagggaagtctaaaggc
tatggctttgtctctttcttcaacaagtgggatgcagagaatgccattcagcagatgggt
ggccaatggctaggtggcagacagatcaggaccaactgggccactagaaagcccccagcc
cctaaaaccacctatgaaaccaacacgaagcacctgtcctttgatgaggttgtgaaccag
tccagccccagtaactgcactgtgtactgtggaggagtcggcaccggtctaacagaacaa
ttgatgagacagaccttctccccctttggacaaatcatggaaatccgtgtgttcccagac
aaaggatactcttttgtgcggtttaactctcacgagggagcagcccatgccattgtgtct
gtgaatgggacttcgatagagggccatatggtgaagtgttactggggtaaagagacccca
gacatgatgagtcctatgcagcaggtgcaacaagttccccagaataaggtgggctttgca
gcccagccctacggccagtatgcccagtggtacggcaatgcccagcagattggccagtac
gtccccaacgggtggcaggtacccacctatggggtttacggccaggcccaggcctggaac
cagcagggttttaatcacttaccggccagtgctgggtggacaggcgtgagtgccctcagt
aacggtggggttatggaagctacacagggattgaatgggagtatgctagcaaaccaggcc
ggtatgggagccactggataccccacacactga
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