Coregonus clupeaformis (lake whitefish): 121585035
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Entry
121585035 CDS
T08357
Name
(RefSeq) vesicle-associated membrane protein 8 isoform X1
KO
K08512
vesicle-associated membrane protein 8
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04130
SNARE interactions in vesicular transport
cclu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
121585035
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121585035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121585035
Membrane trafficking [BR:
cclu04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
VAMP
121585035
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Synaptobrevin
Integrase_H2C2
CD34_antigen
Baculo_F
LMBR1
DotU
DUF5693
DUF3619
DUF6118
LRRC37AB_C
Prominin
RIFIN
Orf78
Motif
Other DBs
NCBI-GeneID:
121585035
NCBI-ProteinID:
XP_041757302
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Position
16:complement(48184756..48196502)
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AA seq
118 aa
AA seq
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MYNDLEQGAVVEQDKVKTLQSQVEGVKDIMTQNVDRILARGERLDDLMGKSEDLQAGAQN
FKHTSQKVARSYWWKNMKLWVVIVVIVLVVILIIVLLATGVIPTSSPAPPLPTPTKGL
NT seq
357 nt
NT seq
+upstream
nt +downstream
nt
atgtataatgacctggagcagggtgcggtggtggagcaggacaaggtgaagaccctgcaa
tctcaggtggagggggtgaaggacataatgacccagaacgtggaccggatcctggcccga
ggagagaggctggatgacctgatgggcaagtcagaggacctgcaggctggggctcagaac
ttcaagcacacgtcccagaaggtggctcgttcctactggtggaagaacatgaagctgtgg
gtggtgatcgtggtcatcgtcctcgtcgtaatcctcatcatcgtactgcttgccactgga
gtcatccctaccagctcgcctgctccccctcttccaacacccacaaaaggactataa
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