Coregonus clupeaformis (lake whitefish): 121585074
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Entry
121585074 CDS
T08357
Symbol
fancc
Name
(RefSeq) Fanconi anemia group C protein isoform X1
KO
K10890
fanconi anemia group C protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
121585074 (fancc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cclu03400
]
121585074 (fancc)
DNA repair and recombination proteins [BR:
cclu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
121585074 (fancc)
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Fanconi_C
Motif
Other DBs
NCBI-GeneID:
121585074
NCBI-ProteinID:
XP_041757358
LinkDB
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Position
16:50792854..50841192
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AA seq
615 aa
AA seq
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MSQAQTQAGSMAGLKPQEVAFWLGKAVEWGQAESPDTQRDTCLHMGPLRAFLQLLLTHIP
TWSSTTETMRTVPFIGQFLGRLCWNPYVTADAESRSLLFQSLWSLYSEEPHNAVERKANQ
WIRNLLCQLATEEEDSATYVLLKHMGLPPKEYNLKVLRKMVWLLVEEVGESCSSLADPNQ
RCSCDSVLAASVACVPLVTCPETAPLIGALLQRPVTCDKAALSQDFLDAVSSAYSRKCVS
LEAQAVVSLWCHSLASLEGAVMSLLDSVLSNPASIPHNLEHTITHSLLPKACSQHGSIFL
IVNDIFRSMLVQVEGNQTVLSLIHTFTLCFLRELAAMQPQECVSLKAFFPHTPQSLLAPL
LTHPSDMAQEAWPEHLAWVTASLQRLTEEEEEEEGNRGQCGVFEAWFLLVQCANWVEVAS
QLLVSARPQDCGPLLWLLTFYHHPTNQGHHRTQQLVAARAVWDHLRSLFLLSAPPLPADQ
LQLLVELMSAVPQQPSLDSLLVASLLVNFAVFSHNPLSGAREIVHMVVQQSGLVREAVCV
LNMVELRLNRERSSCSLTDRVKPRTRALHDTLTHMAQHDTHTHMVQHDTHTDTQPLWQRW
DTHTAVPGCSTNQTL
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaggcccagacccaggcggggtccatggctggcctaaagccccaggaggtagct
ttctggctggggaaggcagtggaatggggccaggctgagagcccagacacccagagagac
acctgcctccacatgggccctctcagggccttcctccagctcctcctcacacacataccc
acatggagctccaccacagagaccatgaggactgttcccttcataggccagttcctcggc
cgcctctgctggaacccttatgtcactgctgatgctgagagccgctcgctcctgttccag
agtctgtggagtctgtattcagaggaacctcacaacgctgtcgagaggaaggccaaccag
tggatacggaatttgttatgtcagcttgctacagaagaagaggacagtgcaacatatgtg
ttactgaaacatatgggcctgccaccaaaggaatacaatttaaaggttctaagaaagatg
gtgtggttgctagtggaggaggttggggagagctgcagcagtttggctgaccctaaccag
aggtgttcgtgtgacagtgttcttgctgcatcagtggcatgtgtccccctggtcacatgt
cctgagactgctcctctcattggtgcgttgctgcagcggccggtgacctgcgataaggca
gccctcagccaggacttccttgatgctgtaagctccgcctactccagaaagtgtgtgtct
ctggaggcccaggcggtggtgtctctgtggtgccatagcctggccagcctagagggggca
gtgatgtctctactggactctgtgctctccaacccagcctccataccgcacaacctagag
cacaccatcactcactcactactgcctaaagcctgctcccagcacggctccatattctta
atagtgaacgacatcttcaggtccatgctggtgcaggtggaggggaaccagactgtgctc
tctctcatccacaccttcactctctgcttcctcagggaactggcagccatgcagcctcaa
gagtgtgtgtccttgaaggccttcttcccacacacaccccagagcttactggcccctctg
ctgacccatccttcagatatggcccaggaggcgtggccagaacacctggcctgggtcact
gcatcattacagagactcactgaggaagaggaggaagaggaaggcaacaggggtcagtgt
ggagtgtttgaggcatggttcctgctggtgcagtgtgctaactgggtggaggtggccagc
cagctactggtctcagccagaccccaggactgtggccccctgctgtggctcctcaccttc
taccaccaccctaccaaccaggggcaccaccggacacagcagctagtggcagccagagca
gtctgggatcacctgaggtcactcttcctgctctcagctcctcctcttcctgctgaccaa
ctgcagttattggttgagctgatgtcagccgtcccccagcagccgtccctggactcgcta
ttggtcgccagcctcctggtcaactttgcagttttctcccacaaccccctgagtggtgcc
agggagatagtccacatggtggtgcagcagtcagggctggtccgtgaagcagtgtgtgtt
ctcaacatggttgagctcagactaaacagagagagatcttcctgcagcctcactgacaga
gttaagcccaggaccagggctcttcacgacacactcacacacatggcacaacacgacaca
cacacacacatggtacaacatgacacacacacagacacacagccactatggcagcgatgg
gatacacacacagccgtgccaggctgctccaccaaccagacgctatga
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