Coregonus clupeaformis (lake whitefish): 121585090
Help
Entry
121585090 CDS
T08357
Name
(RefSeq) synaptobrevin homolog YKT6
KO
K08516
synaptobrevin homolog YKT6
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04130
SNARE interactions in vesicular transport
cclu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
121585090
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121585090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121585090
Membrane trafficking [BR:
cclu04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Ykt6
121585090
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Longin
Synaptobrevin
SLM4
DUF6621
Motif
Other DBs
NCBI-GeneID:
121585090
NCBI-ProteinID:
XP_041757381
LinkDB
All DBs
Position
16:51567875..51570440
Genome browser
AA seq
198 aa
AA seq
DB search
MKLYSLSVLHKGATKSNLLKSAYDLSSFSFFQRSSVQEFMTFTSALIVERSADGSRASVK
EQGYLCHVYVRNDSLSAVVIADSEYPQRVAFTLLDKVLEEFSRQVDSIDWPSGNPDTINY
KALDIHLAKYQNPRDADAMTKVQAELDETKIILHNTMESLLERGEKLDDLVQKSEHLGNQ
SKAFYKTARKQNSCCEVM
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgtacagcctcagcgtcctccacaaaggagcgactaaatccaacctcctcaaa
tccgcctatgacctctcctccttcagcttcttccagcgctccagtgtccaagagttcatg
accttcaccagcgccttgattgtggagcgttctgcagacggcagccgagcctcagtcaaa
gaacaagggtacctgtgccatgtgtatgtgaggaatgacagtctgagtgcagtggtgata
gcagacagcgagtacccccaaagagtcgccttcacactactagacaaagtgctagaggag
ttttccaggcaagtggacagtatagactggccatctggaaacccagacaccatcaactac
aaagccctggacatccacctggccaaataccagaaccccagagatgcagatgcgatgacc
aaagtgcaggctgagctagacgagacaaaaatcattttgcataacaccatggagtctctg
ttggagagaggggagaagctggatgatctggtacagaagtctgaacacctggggaaccag
tctaaagccttttataagactgcacggaagcagaactcatgctgtgaggtcatgtga
DBGET
integrated database retrieval system