Coregonus clupeaformis (lake whitefish): 121585103
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Entry
121585103 CDS
T08357
Name
(RefSeq) 28S ribosomal protein S27, mitochondrial
KO
K17406
small subunit ribosomal protein S27
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
121585103
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
cclu03011
]
121585103
Ribosome [BR:
cclu03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
121585103
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MRP-S27
PPR_1
PPR_2
PPR
Motif
Other DBs
NCBI-GeneID:
121585103
NCBI-ProteinID:
XP_041757395
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All DBs
Position
16:complement(52059986..52065464)
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AA seq
417 aa
AA seq
DB search
MAAYALRRCLGAVKVIHKCGSHRFIAKRCLLSSAYTDSKLWDAREKDHQNLALLAALMDR
TYDRNFPVSSLSISRFVDNISSREEVDQAEYYLYKFRHSPNCWYLRDWTVHSWVRQCLKY
GARDKALHTLKNKVQYGMFPDDFTFNLLIDSFIKDEDFKGACSVVEEVMLQESFDLPTTQ
ILSVYALSNYLATKPELSVSEERALGASLLISGLKQDNSIGLSAQLLGCALLGKVEMAAG
IHAVFRGMPLMWTPGYLGRALAVMERVAAAPGDGKLAKDAVDYLEGLLQDLSSASDSSSG
EEESGGEEEGKKEEEVDEDDQAERDKLPFYASRFKDLSGQLQSGGKVDPSPLQVLVSSLV
QQSLASAEGPDMEQYQRKVGEWEAERQQLIRREKEMRKRAEEERLAHQAAKAAAKQG
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggcagcctacgcgttgcgacgttgtttaggagctgtcaaagttatccataaatgtgga
agtcacagatttatagccaaaagatgtctactttcctcagcatacacagactccaaatta
tgggacgcaagagagaaagatcatcaaaatctggcgttgttggccgccttgatggatagg
acgtatgaccgaaacttccccgtcagctccctgtcaatatcacggtttgttgacaacata
tcgtcaagagaagaggttgatcaagcagagtactatctttataaatttcgccacagccca
aactgttggtacctcagagactggactgtccatagctgggtcagacagtgtctcaaatat
ggggccagagacaaggccctgcacaccctcaagaacaaggtgcaatatggaatgttccca
gatgatttcacgttcaaccttctgatagattccttcataaaagatgaagacttcaaaggt
gcctgttctgtcgtggaagaggtgatgcttcaggagtcttttgatctgcccacgacacag
atcctgtccgtgtatgcacttagcaattacctagcaaccaaaccagagctcagcgtgtca
gaagagagggctctgggagcatcactgctgatatctggtctgaagcaggacaactctata
ggcctcagcgctcaactgctgggctgtgctttactaggtaaggtggaaatggcggcaggg
atccatgctgtgttcaggggcatgcctctgatgtggaccccagggtatctgggccgggcc
ctggccgtcatggagagagtagctgccgctcctggagatggcaaactagcaaaggatgct
gtggattacctggagggtctgttgcaagacctgtcctctgcctcagactcctcctctgga
gaggaggagtcaggaggagaggaggaggggaagaaagaggaggaggtggatgaggacgac
caggcagagagagataaactacccttctatgccagcaggtttaaggatctgagcgggcag
ctccagtccgggggtaaggtggaccctagtcccctgcaggtgctggtctccagcctggtc
cagcagagcctggcctcagcagagggccctgacatggagcagtaccagaggaaggtgggg
gagtgggaggcagagaggcagcagctcatcagaagggagaaagagatgaggaagagggct
gaggaggagagactggcccatcaggcagccaaagcagctgcaaaacagggctga
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