Coregonus clupeaformis (lake whitefish): 121585147
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Entry
121585147 CDS
T08357
Name
(RefSeq) THO complex subunit 4 isoform X1
KO
K12881
THO complex subunit 4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03013
Nucleocytoplasmic transport
cclu03015
mRNA surveillance pathway
cclu03040
Spliceosome
cclu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121585147
09122 Translation
03013 Nucleocytoplasmic transport
121585147
03015 mRNA surveillance pathway
121585147
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
121585147
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121585147
03041 Spliceosome [BR:
cclu03041
]
121585147
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
121585147
TREX complex
121585147
Spliceosome [BR:
cclu03041
]
Complex C
Other components
EJC/TREX
121585147
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
121585147
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
121585147
NCBI-ProteinID:
XP_041757453
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All DBs
Position
7:complement(9350926..9354196)
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AA seq
264 aa
AA seq
DB search
MADKMDMSLDDIIKQNRQQRGGAGGRGGGRGRGRGGSGGGRGGGVGRGAAGGGFGGRGGG
SGPMRNRPNLSRGRARPTPYSRPKQLPDKWQHDMYGNHGFNASAGGGAGVETGGKLLVSN
LDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLD
GRPMNIQLVTSQIDTQRRPPMQGMNRGGGMNRGRGGVFRGMQRGRGAGRGGGRGRGGRGG
STKPLSAEELDAQLDAYNARMETS
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atggccgataagatggatatgtctctagacgacatcatcaagcagaacaggcagcagaga
gggggcgcaggaggccgtggtggtggaagaggccgtggccggggaggctctggcgggggc
cgaggtggtggtgttggccgtggagccgccggtggaggctttggaggccgaggtggagga
tcgggccccatgaggaaccgaccgaacctgagccgtggcagagcaagacctacgccatac
agcaggcctaagcagcttcctgataaatggcaacacgacatgtacggcaatcatggcttc
aatgccagtgctgggggtggcgctggtgtggaaaccggagggaagcttcttgtctccaat
ctcgactttggcgtttcagacgcagatattcaggagctctttgcggagtttggtacactg
aagaaggcagctgttcactacgaccggtcgggcaggagcttaggcacggcagacgtccac
tttgagaggaaggccgatgctctgaaagctatgaaacagtacaacggtgtaccacttgat
gggcgtcccatgaacattcaacttgtcacatcacagatcgacacacaaagacgaccaccc
atgcagggtatgaaccgaggtggtggcatgaacaggggtcgtggtggtgtgttcagaggg
atgcagagaggacgtggagcaggtcgtggaggaggcaggggccgaggtggccgcggggga
agcaccaagccactttccgctgaagagctggatgcccagctagatgcctacaatgccagg
atggaaaccagctaa
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integrated database retrieval system