Coregonus clupeaformis (lake whitefish): 121585153
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Entry
121585153 CDS
T08357
Name
(RefSeq) xylosyltransferase 2-like isoform X1
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
cclu00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
cclu01100
Metabolic pathways
Module
cclu_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
121585153
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
121585153
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cclu01003
]
121585153
Enzymes [BR:
cclu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
121585153
Glycosyltransferases [BR:
cclu01003
]
O-Glycan biosynthesis
Glycosaminoglycan
121585153
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xylo_C
Branch
Motif
Other DBs
NCBI-GeneID:
121585153
NCBI-ProteinID:
XP_045066895
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All DBs
Position
35:24499057..24512820
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AA seq
879 aa
AA seq
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MVASVRVRKLLRRYKLAIAAALTILLIQGLVVWSLRSLEEGETERKTRRSKLPDHNSQDP
KREAVGWERQNALSGRSGARWNSRLERTGATAASALRRGNKHRGKTTVRVKVPLGQGVGV
AADGVPPHDPSSSRNFTDTRGGGEGAARLPPPAMPGEPGSVEGAPQAPSSDFVPKCDIMG
KDALSALHRAGSRQCRQEIANIVCQHQAGQLMPRALPQFCPQHGFSSPVQTADELDNDLS
KVENPVRVAFVLVVHGRAIRQLKRLIKAIYHRDHFYYIHVDKRSNYLHREVQQIAQQYPN
VRATPWRMVTIWGGASLLKAYLRSMQDLLSMLDWNWDFFINLSATDFPTRTNDELVAFLS
QHRDQNFLKSHGRENARFIKKQGLDRLFHECDNHMWRLGERTIPEGLEVSGGSDWFSLTR
RFVEYVINSQDELVAGLKQFYTYALLPAESFFHTVLGNSHMCDSLVDNNLRVTNWNRKLG
CKCQYKHIVDWCGCSPNDFKPQDLIRIQQLTRPTFFARKFESTVNQEAIDILDTHLYGHY
APGTVAIKAYWESLFERADGVGSLSDVALTAYSSFFRLGLRSLESSQTSLDTCKYEPIGY
PVSVHLYFYDERFQGYLVRQEVQNVGSRVRETVEVWAVPQATMQLENNLREFERLKNLEV
GTEWDPKERIFRNFGGVIGPLDEPVAVQKWVRGPNLTATIVWIDPAQTVAASYDISVDVD
AEYTQYKPPLQRPLRPGAWTVRVLRLWERVAEARFLVMPLAFKGREPLRQEEDSWLHAGP
PGNLYLEQGFQQLRSVLKLPPQEPALQEAQQRAQLVGKPLDAWVDSTVGAFWVTGDLCST
QPSPGPCPSLGPCTKSTWSSLAPDPKSELGPVKGDGRIR
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atggtggccagcgtcagagtgcggaagctcctccgacgatacaaactagcgattgccgcc
gcgttaacgattcttctgattcaagggctagtggtatggagtctgagaagtctcgaagag
ggcgagacggagaggaaaacacggcggtctaagctgcctgaccacaacagccaggacccc
aaaagggaggcggtgggctgggagagacagaacgccttgtctgggaggagcggggcccga
tggaacagcaggctggagaggacgggggccacggccgccagcgccctccggaggggcaac
aagcaccgggggaagaccaccgtcagggtgaaggtgcccctgggccagggggtaggggta
gcagctgacggtgttcccccccacgacccctccagcagccgtaacttcactgatacccgg
ggcggaggggagggggcggccagactaccccctccagccatgccaggggaaccgggcagt
gtggagggggcgcctcaagcccccagcagcgactttgtgcccaagtgtgacatcatgggc
aaggatgccctgtcagccctgcaccgcgccggctcgcggcagtgccggcaggagatcgcc
aacattgtgtgccagcatcaggccgggcagctcatgccaagggcactgcctcagttctgc
ccgcagcacggtttttccagcccggtccagacagctgatgagctggacaatgacctgtcc
aaagtggagaacccagtcagggtggctttcgtcctggtggtccacggccgggccatcaga
cagctcaaacgcctcatcaaagccatataccaccgagaccacttctactacatccacgtg
gacaagcgctccaactacctgcatcgggaggtgcagcagatcgcccagcagtaccccaat
gtgcgtgccacgccctggcgcatggtgaccatctggggcggtgccagcctgctgaaggcc
tacctgcgcagcatgcaggacctgctctccatgctggactggaattgggacttcttcatc
aacctcagtgccactgacttccccaccaggaccaacgatgaactggtggcttttctgtcg
cagcacagagaccagaacttcctcaagtcacatgggcgggagaacgcgaggttcataaag
aagcagggtctggaccggctgttccatgagtgtgacaaccacatgtggcggctgggtgag
cggaccatccctgagggcctggaggtgtctgggggctctgactggttctccctcaccagg
cgtttcgttgagtacgtcatcaactcccaggatgagctggtggcgggcctgaaacagttc
tacacctacgccctgctccccgctgagtccttcttccacacagtgctggggaacagtcac
atgtgtgactctctggtggacaacaacctgcgtgtaaccaactggaacaggaagctgggc
tgtaagtgccagtacaaacacatagtggactggtgcggctgctcccccaacgacttcaaa
ccacaggacctcatcaggatacagcaactgacccggcccacgttctttgcccgtaagttt
gagtccacggtgaaccaggaggctatagacatcctggacacccacctgtatgggcactac
gccccagggacggtggccatcaaggcctactgggagagcctgtttgagcgggcggatggg
gtgggctccctcagtgacgtggccctcacggcctactcctccttcttccgcctgggcctc
aggagcctggagagcagccagaccagcctggatacctgcaagtatgagccaataggctac
ccggtgtcagtgcacctgtatttctacgacgagcgtttccagggctacctggtccgtcag
gaggtgcagaacgtggggtcaagggtcagggaaacggtggaggtgtgggccgtgcctcag
gccaccatgcagctggagaacaacctcagggagtttgagcggctcaagaacctggaggtg
ggcacagagtgggaccccaaggagagaatcttccggaacttcggcggtgtgatcgggccg
ctggacgagccggtggcagtacagaagtgggtgagggggcccaacctcactgctaccatc
gtgtggatcgaccccgcccagacggtggcggcgtcttatgacatcagcgtggatgtggat
gcagagtacacgcagtacaagcccccgctgcagcggccgctccgccccggggcctggacg
gtcagggtgctcaggctgtgggagcgcgtggccgaggctcgcttccttgtcatgcccctg
gccttcaaaggacgagagccactacgccaagaggaggacagctggctgcacgcggggcca
ccaggcaacctgtacctagagcagggcttccagcagctgagatctgttctgaagctgccc
ccccaggagcccgccctgcaggaggctcagcagagggcccagctggtaggcaagcccctg
gatgcctgggtggacagcaccgtgggggccttctgggtgaccggggacctgtgctccacc
cagccctccccgggcccctgcccttccctgggcccctgcaccaagtccacctggagctcc
ctcgccccagaccccaagtcagaacttggccctgtcaaaggtgacggccggatcaggtag
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