KEGG   Coregonus clupeaformis (lake whitefish): 121585177
Entry
121585177         CDS       T08357                                 
Name
(RefSeq) interleukin-1 beta
  KO
K04519  interleukin 1 beta
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04010  MAPK signaling pathway
cclu04060  Cytokine-cytokine receptor interaction
cclu04217  Necroptosis
cclu04620  Toll-like receptor signaling pathway
cclu04621  NOD-like receptor signaling pathway
cclu04623  Cytosolic DNA-sensing pathway
cclu04625  C-type lectin receptor signaling pathway
cclu05132  Salmonella infection
cclu05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    121585177
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    121585177
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    121585177
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    121585177
   04621 NOD-like receptor signaling pathway
    121585177
   04623 Cytosolic DNA-sensing pathway
    121585177
   04625 C-type lectin receptor signaling pathway
    121585177
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    121585177
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    121585177
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:cclu04052]
    121585177
   00536 Glycosaminoglycan binding proteins [BR:cclu00536]
    121585177
Cytokines and neuropeptides [BR:cclu04052]
 Cytokines
  Interleukins
   121585177
Glycosaminoglycan binding proteins [BR:cclu00536]
 Heparan sulfate / Heparin
  Cytokines
   121585177
SSDB
Motif
Pfam: IL1 IL1_propep
Other DBs
NCBI-GeneID: 121585177
NCBI-ProteinID: XP_041757511
LinkDB
Position
16:53825723..53828744
AA seq 260 aa
MEFESNCSLIKNAANSAAWSAKLPQGLDLEVSCHPITMRHIANLIIAMERLKGGKGVTMG
TEFKDKDLLNFLLESAVEEHIVLELESAPPASRKAAVFSSTSQYEYSVTDSENKSWVLMK
EAMELHSMMLQGGSSYHKVHLNLSTYVTPVPIETEARPVALGIKGSNLYLSCSTSGGRPT
LHLEEVVDKEQLKSISQQSDMVRFLFYRRTTGVDISTLESARFRNWFISTAMQQDNTKTV
DMCQKAAPSRLTTFTIQRHN
NT seq 783 nt   +upstreamnt  +downstreamnt
atggaatttgagtcaaactgcagtttaataaagaacgctgccaacagtgcagcatggagc
gccaagctgcctcagggtctggatctggaggtatcctgtcaccccatcaccatgcgccac
atagccaacctcatcatcgccatggagaggttaaagggtggcaagggggttaccatgggc
accgagttcaaggacaaggacctgctcaacttcttgctggagagtgctgtggaagaacat
atagtgttggagttggagtcagcacccccagcgagcaggaaggcagcagtgttcagcagt
acatcacagtacgagtatagcgtcactgactctgagaacaagagctgggtcctgatgaag
gaggcaatggagctgcactccatgatgctccagggaggcagcagctaccacaaagtgcat
ttgaacttgtctacgtacgtcacgcccgtccccattgagactgaagccagacctgtagcc
ctgggcataaagggatccaacctttacctgtcctgctccacatcgggaggcaggcccacc
ctgcacctagaggaggttgtggacaaggagcagctgaagtccatcagccagcagagcgac
atggtgcgtttcctgttctacagacggaccaccggggttgacatcagtaccctggagtct
gccaggttcaggaactggttcatcagcacggccatgcagcaggacaacaccaagacggtg
gacatgtgtcagaaggcagcccccagccgcctcaccacctttaccatccagcgccacaac
taa

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