Coregonus clupeaformis (lake whitefish): 121585177
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Entry
121585177 CDS
T08357
Name
(RefSeq) interleukin-1 beta
KO
K04519
interleukin 1 beta
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04010
MAPK signaling pathway
cclu04060
Cytokine-cytokine receptor interaction
cclu04217
Necroptosis
cclu04620
Toll-like receptor signaling pathway
cclu04621
NOD-like receptor signaling pathway
cclu04623
Cytosolic DNA-sensing pathway
cclu04625
C-type lectin receptor signaling pathway
cclu05132
Salmonella infection
cclu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121585177
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
121585177
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
121585177
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
121585177
04621 NOD-like receptor signaling pathway
121585177
04623 Cytosolic DNA-sensing pathway
121585177
04625 C-type lectin receptor signaling pathway
121585177
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
121585177
09171 Infectious disease: bacterial
05132 Salmonella infection
121585177
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cclu04052
]
121585177
00536 Glycosaminoglycan binding proteins [BR:
cclu00536
]
121585177
Cytokines and neuropeptides [BR:
cclu04052
]
Cytokines
Interleukins
121585177
Glycosaminoglycan binding proteins [BR:
cclu00536
]
Heparan sulfate / Heparin
Cytokines
121585177
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IL1
IL1_propep
Motif
Other DBs
NCBI-GeneID:
121585177
NCBI-ProteinID:
XP_041757511
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All DBs
Position
16:53825723..53828744
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AA seq
260 aa
AA seq
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MEFESNCSLIKNAANSAAWSAKLPQGLDLEVSCHPITMRHIANLIIAMERLKGGKGVTMG
TEFKDKDLLNFLLESAVEEHIVLELESAPPASRKAAVFSSTSQYEYSVTDSENKSWVLMK
EAMELHSMMLQGGSSYHKVHLNLSTYVTPVPIETEARPVALGIKGSNLYLSCSTSGGRPT
LHLEEVVDKEQLKSISQQSDMVRFLFYRRTTGVDISTLESARFRNWFISTAMQQDNTKTV
DMCQKAAPSRLTTFTIQRHN
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atggaatttgagtcaaactgcagtttaataaagaacgctgccaacagtgcagcatggagc
gccaagctgcctcagggtctggatctggaggtatcctgtcaccccatcaccatgcgccac
atagccaacctcatcatcgccatggagaggttaaagggtggcaagggggttaccatgggc
accgagttcaaggacaaggacctgctcaacttcttgctggagagtgctgtggaagaacat
atagtgttggagttggagtcagcacccccagcgagcaggaaggcagcagtgttcagcagt
acatcacagtacgagtatagcgtcactgactctgagaacaagagctgggtcctgatgaag
gaggcaatggagctgcactccatgatgctccagggaggcagcagctaccacaaagtgcat
ttgaacttgtctacgtacgtcacgcccgtccccattgagactgaagccagacctgtagcc
ctgggcataaagggatccaacctttacctgtcctgctccacatcgggaggcaggcccacc
ctgcacctagaggaggttgtggacaaggagcagctgaagtccatcagccagcagagcgac
atggtgcgtttcctgttctacagacggaccaccggggttgacatcagtaccctggagtct
gccaggttcaggaactggttcatcagcacggccatgcagcaggacaacaccaagacggtg
gacatgtgtcagaaggcagcccccagccgcctcaccacctttaccatccagcgccacaac
taa
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