Coregonus clupeaformis (lake whitefish): 121585191
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Entry
121585191 CDS
T08357
Symbol
abca2
Name
(RefSeq) ATP-binding cassette sub-family A member 2
KO
K05642
ATP-binding cassette, subfamily A (ABC1), member 2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu02010
ABC transporters
cclu04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
121585191 (abca2)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
121585191 (abca2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cclu02000
]
121585191 (abca2)
Transporters [BR:
cclu02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
121585191 (abca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
DUF4162
Motif
Other DBs
NCBI-GeneID:
121585191
NCBI-ProteinID:
XP_045081736
LinkDB
All DBs
Position
16:57758104..57845953
Genome browser
AA seq
2530 aa
AA seq
DB search
MGFLHQLHLLLWKNVSLKRRGPWVLAFEIFIPLVLFFILLGLRQKKPAIPVKEAFYSAAP
LTSAGIIPIMQSLCPDGQRDEFGFLQYKNSTVTQLLERIHEVVLQNHLFTADRPGLGQEL
ESLQQHLESLSTSTGSSPLDNNFNTSQGFTVASVLKNQSVFHQFLVRNLSLPNDTASLLL
STPVNLKEVFNLIFGLYPRTGGGNSHSSGGEKETAHTPAEKILQLEEKLLGAMHSLDGGL
IHKALIDPTKAVHRQALLKLMSQALGLAGGGAGQRYDPQGLKEVEGVLLTGAMLEMLTCG
EDGTSELSKILLVPEKQQSLLQAYRSSVCGGGAGQRTERFGEMSQELREQIDTQSLIDKL
HLAQANSSAPLSQSHLGALLKDLADVERLLRDVDLLSGLARLLPKGACAGHAPPGALANT
TTSWSLNATTWGPNTTENPWGEGGEEEGGGREKEEVKEEENPRSQFSAFVQLWAGLQPIL
CGNNRIIEPEALKQGNMSSLGFTSKEQRNLGLLVHLMTTNPKILYSPIGSQVDKVIQKAN
ETFAFVGNVTHYARVWLNISAQLRTYLEEGKLHHHLAWLQQLTSDLRGHPELLNGTDSDL
LRGLLEGNYTLPNTSTLLQQLDTIDNAACGWTHFMSKVSVDIFKGFPDEDSIVNYTLNQA
YHDNISVFASVIFQTNIDGSLPPHVLYKIRQNSSFTEKTNEIRRAYWRPGPNTGGKFYFL
YGFVWIQDMMERAIINTFVGHDVVEPGNYVQMFPYPCYTRDDFLFVIEHMMPLCMVISWV
YSVAMMIQHIVAEKEHRLKEVMKMMGLNNAVHWVAWFITGFVQLSISVTALTGILKYGRV
LLHSDIFIIWLFLSIYAIATIMFCFLVSVIYSKAKLASACGGIIYFLSYVPYMYVAIREE
VAHDKITAFEKCIASLMSTTAFGLGSKYFALYEVAGVGIQWRTINQSPVEGDDFNLGLSM
MMLIIDASVYGVLTWYIEAVHPGMYGLPRPWYFPLQKSYWLGSGRVETWEWPWGGGARLS
VMEEDQACAMEHRRSEEIRGIEEEPCHLPLVVCIDKLTKVYKTGNKLALNKLSLNLHENQ
VVSFLGHNGAGKTTTMSILTGLFPPTSGSATIYGHDIRTDMERIRQNLGMCPQHNVLFDK
LSVEEHLWFYSKLKGMAEEDIRKEMDKMIDDLELNNKRHSLVQTLSGGMKRKLSVAIAFV
GGSRAVILDEPTAGVDPYARRAIWDLILKYKQGRTILLSTHHMDEADLLGDRIAIISHGK
LKCCGSPLFLKSTYGDGYKLTLVKKQSESGDQVTQPQPPSTLSPSSSSLSPSSSSLSPSS
SSLSPSTSSSLSPCSEARVTQFIRQFVGSCLLLSDSNTELSYVLPSEAVKKGCFERLFQA
LEQNLAILALTSFGVMDTTLEEVFLKVSEEDQSLENSDADMKDSPGGISVGKPADAVGLG
CSGNLVMCSRLSQSQSSLRSSSSLGSVRGNEEGLYADFYGDYCRLFDNGQDPHSTSLRAD
AEEASPEPVVLEGQGSFKLEGWWLKLRQFHGLIVKRFHCAKRNTKGLFSQILLPAFFVCV
AMTVALSVPSIGDLPPLILSPSQYHNYTQPRGNFIPYANEDRPQYRSKLSPDASPQKIAN
TLRLPSGVGATCVLKTPFNSTLDQLAQTLNPSANNSKTLAARYFDSMCLDSFTQGVPLSN
FVPPPPSPAPSDDPDTRFDDGLWNFTATTPTTVRETVTSPPTLPLSIREPVRCICSMQGT
GFSCPSGVGGRPPLMKVVTGDILVDITGRNVSEYLLYTSDRLRLHRYGGLTVGNIQKSVP
ASFGKKTPPMVRKIAVRRSAQVLFNNKGYHSMPTYLNVLNNAILRANLPPGKGNPAAYGI
TLTNHPMNRTSASLSLDYLLQGTDVVIAIFIIVAMSFVPASFVVFLVAEKSTKAKHLQFV
SGCDPVIYWLANYIWDMLNYLVPATCCVLILFVFDLPAYTSPTNFPAVLSLFLLYGWSIT
PIMYPASFCFEVPSTAYVFLIVINLFIGITATVATFLLQLFEHDKDLKLVNSYLKSCFLI
FPNYNLGHGLMEMAYNEYINEYYAKIGQFDKIKSPFEWDIVTRGLVAMTIEGFVGFFITI
LCQYNFLRKPSRVPVSSQPIEDDDVDVACERRRVLRGDADNDMLKIDNLTKVYKSRKMGR
ILAVDRLCLGVRPGECFGLLGVNGAGKTTTFKMLTGDESTTGGEAFIGGNSILRELLRVQ
QSIGYCPQFDALFEDLTAREHLELYTRLRGIPWKDEQRVVSWALEKLELSKYADKPAGTY
SGGNKRKLSTAIALIGYPSLIFLDEPTTGMDPKARRFLWNLILDIIKTGRSVVLTSHSME
ECEALCTRLGIMVNGRFKCLGSIQHLKNRFGDGYMITVRTRTSSSVKEVVRFFNRNFPEA
VLKERHHTKVQFQLKSERISLAQVFSKMEQVVEVLGIEDYSVSQTTLDNVFVNFAKKQSD
NLEQQESSPPAGGQSPLQRLLSLLRPRPANTELSALVSEEPGELESDDDEGLISFEEERV
QLSFNTDTVC
NT seq
7593 nt
NT seq
+upstream
nt +downstream
nt
atgggattccttcatcagctacatcttctgttgtggaagaatgtttctttgaagaggaga
ggaccgtgggtgttggcctttgagatcttcatccccctggtcctcttcttcatcctgctg
ggcctgcgccagaagaaacctgctattcccgtcaaggaagccttctacagcgcagctcca
ctcacctcagcaggcatcattcccatcatgcagtctctgtgtcccgacggccagagggac
gagtttggcttcctgcagtacaagaactccactgtgacccagttgttggagcggatccat
gaggtggtgttgcagaaccacctgtttacagcagacaggccaggactgggccaggagctg
gagtccctacagcaacacctggagagcctcagcacatccacagggtcctccccactggac
aacaacttcaacaccagccaagggttcacagtagctagtgtgttgaagaaccagtcagtg
ttccatcagttcctggtcaggaatctgtccctccccaacgacaccgccagcctgcttctc
tccactcctgtcaacctcaaagaggtcttcaacctgatatttggcctgtaccccagaact
ggaggggggaatagtcacagttctggaggggaaaaagagactgcacacacacctgcagag
aagatccttcaactggaggagaagctgctaggagccatgcatagtctggatggtggactg
atccacaaagctttaatagacccaaccaaagcagttcatcggcaggccctgctcaaactc
atgtcccaggctttaggcctagcaggaggaggggcaggccagagatacgacccccaggga
ctgaaggaggtggagggtgttctcctgactggtgccatgttggaaatgcttacctgtggg
gaggacgggactagtgagctgagcaagatcctattggttcctgagaagcagcagtccctg
ctccaggcctatcgcagctcagtgtgtggtggtggggcgggacaaaggactgagcgcttt
ggagagatgagccaggagctgcgagagcagatagacacacagagccttattgacaagctg
catctggcgcaagccaactcctcggcccctctatcccagtcccacctgggtgctctgctg
aaggacttggctgacgtggagaggctcctcagggatgtagacctgctgtcaggcctggct
cgcctgctccccaagggggcctgtgccggccacgccccccccggggctctagccaacacc
accacttcctggtccctcaatgccaccacctgggggcccaataccaccgagaacccctgg
ggggagggcggagaggaggaggggggaggaagagaaaaagaggaagtgaaagaagaagag
aaccctcgctcgcagttttctgcctttgtgcagctgtgggcagggctgcagcctattctg
tgtgggaacaacaggatcattgagccagaggctttaaagcaggggaatatgagctctctg
ggctttaccagtaaagagcagcgcaatctgggcttactagtgcacctgatgactacaaat
cccaagatcctctactctcccattggctcacaggtggacaaagtcattcagaaggccaat
gagacgtttgcgtttgtggggaacgtgactcactacgcccgggtgtggctcaacatctct
gcccagctcagaacctacctggaggagggcaagctgcaccaccacctggcctggttgcag
cagttgacctctgacctacgtggtcacccggagctgctgaatgggacagacagtgatctg
ctgcgtgggctgctggagggcaactacaccctgcccaacacctccaccctgctgcagcag
ctggacaccatcgacaacgccgcctgcggctggacacacttcatgtccaaggtcagtgtg
gatatcttcaagggttttccggatgaggacagcatcgtcaactacacactgaaccaagct
taccatgataacatctcagtgtttgccagtgtgatattccagaccaacatagatggctcc
ctgcctcctcatgtcctctataagatcagacagaactctagtttcacagagaaaaccaac
gagatccgccgggcctactggcgcccggggcccaacacggggggaaagttctacttcctc
tacggctttgtgtggatccaggatatgatggagagagccatcattaatacgtttgtgggc
catgacgtggtggagcctggcaactatgttcagatgttcccttacccctgctacaccaga
gacgacttcctgtttgtgatcgagcacatgatgcctctgtgcatggtgatctcctgggtc
tactctgtagccatgatgatccaacacattgtggctgagaaggagcaccggctcaaagag
gtgatgaagatgatgggcctgaacaacgcggtccactgggtggcctggttcatcactggg
tttgtccagttgtccatctcagtgaccgccctgacgggcatcctgaagtacggccgggtg
ctccttcacagcgacatcttcatcatctggctcttcctctccatctacgccatcgccacc
attatgttctgtttcctggtgtcagtgatctactccaaggccaagctggcgtcagcgtgt
ggcgggataatctacttcctcagctatgtcccatacatgtacgtggccatcagggaggag
gtggcccatgacaagatcactgccttcgagaagtgcatcgcttctctaatgtcgaccaca
gcgttcggcctgggctcgaagtactttgccctgtatgaggtggctggggttggcatccag
tggcgcaccatcaaccagtcacctgtagagggcgatgacttcaaccttggcctgtccatg
atgatgctcatcatcgatgctagtgtgtatggagtactcacctggtacatagaggctgta
catccagggatgtatgggctgcctcggccgtggtacttccccctgcagaagtcctattgg
ctgggaagtgggcgtgtggagacgtgggagtggccctgggggggaggggccaggctgagt
gtcatggaggaggaccaggcgtgtgccatggaacaccggcgatctgaggagatccgtggt
attgaagaggagccctgccacctgcctctggtggtttgtatagacaagctgaccaaggtc
tacaagacgggcaataagctggccctcaacaagctgagcctcaacctccacgagaaccag
gtggtgtccttcctgggacacaacggagccggcaagaccaccaccatgtctattctgaca
ggtctgttcccgcccacctctggctcagccaccatctacggccatgacatccgtactgac
atggagcggatcaggcagaacctgggcatgtgtccacagcacaatgtgctctttgacaag
ctcagcgtggaggagcacctgtggttctactctaaactcaaaggcatggccgaggaagac
atccgcaaggagatggacaagatgatagacgatctagagttgaataataagcgtcacagc
ctggtgcagaccctgtctggggggatgaagaggaagctgtccgtggccatagcgtttgtg
ggcggctcccgggccgtcatcctggatgagcccacggcgggggtggacccctatgcacgc
agagccatctgggacctcatcctcaagtacaaacagggtcgcaccatcctgctgtccacc
caccacatggatgaggctgacctgttaggagaccgcatagccatcatctcccatggaaaa
ctcaagtgctgtggctccccactctttctcaagagcacatacggagacggctacaaactc
accctggtcaagaaacagagtgagagcggagaccaggtcacccagccccagcctccctcc
accctgtccccttcctcctcctccctgtccccttcctcctcctccctgtccccctcctca
tcctccctgtccccctccacctcctcctccctgtctccctgctcggaggcccgggttacc
cagttcattcgtcagtttgtggggtcctgtctgctgctgtctgactccaacactgagcta
tcctacgtgctgccctctgaggctgtcaagaagggctgcttcgagaggctattccaggca
ttggagcagaatctggccatcttggctctgaccagcttcggggtgatggacaccactctg
gaggaggtcttcctcaaggtgtctgaggaggaccagtccctggagaacagtgatgccgac
atgaaggattccccaggcggtatctcagtggggaaacctgctgatgccgtgggtctgggg
tgctctggaaacctggtgatgtgctccaggctcagccagagccaatcctccctgcgctcc
tcctcctccctggggtccgtacgggggaatgaggaagggctctacgcagacttctacgga
gactactgccgcctcttcgacaatggacaggaccctcactctaccagcctgagggcggat
gcggaggaagcctcccctgagcctgtggtcctggaggggcagggcagcttcaagctggag
ggctggtggctgaagctacgccagttccacggcctgatcgtcaagagattccactgcgcc
aagaggaacaccaagggcctcttctctcagatcctgctgcccgcattcttcgtctgcgtg
gccatgactgtcgcactgtctgtgccttccatcggagatctgccaccactgatcctgtcc
ccatcccagtaccacaactacacccagccccgtggcaacttcatcccctacgccaacgaa
gaccgcccacagtacaggagtaaactgtccccagatgccagccctcagaagatcgccaac
acactgcgtctgccatctggcgtgggtgccacctgcgtcctcaaaacgcccttcaacagc
accctggaccagctggcacagacgctcaaccccagcgccaacaacagcaagaccctggcc
gcccgctactttgactccatgtgtctggactccttcacccagggagtgcccctgtccaac
ttcgtaccccctcccccctcaccagccccctccgacgaccccgacactcgctttgacgat
gggctgtggaacttcactgccaccactcctaccactgtcagggaaacagtgacttctccc
cccaccctgcctctgtccatccgggagcctgttcgttgtatctgctccatgcagggtacg
ggcttctcctgccccagcggggtgggggggcggccgcccctcatgaaggtggtcaccggg
gacattctggtagacatcaccgggcgcaacgtgtcagagtatctcctctacacctccgac
agactgcgcctgcacagatatggaggactcacagtaggcaacatacagaaatcagtccca
gcatcctttgggaaaaagactccgcccatggttcgcaaaatagcagtgcgcagatcagct
caggtgctgttcaataataaagggtaccacagcatgccaacctatctcaacgtcctcaac
aatgccatcctgcgtgccaacctgcctccaggcaagggcaaccctgctgcatacggaatc
acactgaccaaccaccccatgaaccgcaccagtgcaagcctctctctggactatttgctc
cagggcactgatgtggtgatagctatcttcattatcgtggccatgtcctttgtaccagcc
agctttgtggtctttctggtggcagagaagtcgaccaaggccaagcacctgcagtttgtg
tctggatgtgaccctgtcatctactggttggctaactatatatgggacatgttgaactac
ttggtgcctgccacgtgctgtgtccttatcctgtttgtctttgaccttcctgcgtataca
tccccaaccaacttccctgcggtcctgtctctcttcctcctctacgggtggtctatcact
cctatcatgtacccggcctccttctgtttcgaggtgcccagcacggcctatgtgttcctc
atcgtcatcaaccttttcataggcataactgccacagtggccacgttcctgctgcagctc
tttgagcatgacaaggatctgaaactggtgaacagctacctaaagtcctgtttccttatc
ttcccaaattacaacctgggtcacggcctgatggaaatggcatacaacgaatacatcaat
gagtactatgctaaaataggtcagtttgacaagatcaagtctccatttgagtgggacatt
gtgactagagggctggtagccatgacaatcgagggctttgtaggattcttcatcaccatc
ctgtgccagtacaacttcctcaggaaaccctcgagagtaccagtgagcagccagcccata
gaagatgatgatgtggatgtggcctgtgagagacggagagtactgagaggagatgctgac
aacgacatgctgaagattgacaacctcaccaaggtgtacaagtcgaggaagatggggcgt
atcttggctgttgaccggctgtgtttgggcgtgcgtcctggggagtgtttcggcctcctg
ggggtgaacggagcagggaagaccaccacctttaagatgctgactggagacgagagcacc
acgggaggagaggctttcatagggggaaatagtatcctgagggagctgttgagagtgcag
cagagcattggttactgccctcagtttgatgccttatttgaagacctgacagccagagag
cacctggagctgtacacacgcctccgaggcatcccctggaaggacgagcagagggtggtc
tcatgggccctagagaagctggagctgtccaagtatgcagacaagccggctggcacctac
agtgggggaaacaagcgcaagctgtctactgccatcgccctcattggatacccctctctt
atcttcctggatgaacctactacagggatggaccctaaggcccgcagattcctctggaac
ctcatccttgacatcatcaagacgggacgctctgtggtgctgacatcacacagtatggag
gaatgtgaggctctgtgcaccagactaggcatcatggtcaacggcaggttcaaatgcctg
ggcagcatccaacacctcaagaacaggtttggtgatggttacatgatcacagtgcggact
agaaccagttccagtgtgaaggaggtggtgagattcttcaacaggaatttccctgaggct
gtactaaaggagcgccaccacactaaggtccagttccagctgaagtccgagaggatctcc
ctggcccaggtgttcagtaagatggagcaggtggtggaggtgctggggatagaggactac
tctgtcagccagaccacactggacaacgtgtttgtgaactttgccaagaagcaaagtgac
aacctggagcagcaggagagttccccccctgctggaggccagtcgccactgcagcgcctg
ctcagcctgctgaggccccggcctgcaaatacggagctcagcgccctggtcagcgaagag
ccgggggaactggagagtgacgacgatgagggcctcatcagctttgaagaggagagggtg
cagctctcctttaacacagatactgtctgttga
DBGET
integrated database retrieval system
