Coregonus clupeaformis (lake whitefish): 121585195
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Entry
121585195 CDS
T08357
Name
(RefSeq) syntaxin-binding protein 1-like isoform X1
KO
K15292
syntaxin-binding protein 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121585195
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121585195
Membrane trafficking [BR:
cclu04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
121585195
SNARE
SNARE associated proteins
Syntaxin-binding proteins
121585195
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121585195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
YlbD_coat
SGT1
FRB_dom
Motif
Other DBs
NCBI-GeneID:
121585195
NCBI-ProteinID:
XP_041757551
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All DBs
Position
16:complement(57607261..57642637)
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AA seq
604 aa
AA seq
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MAPLGLKAIVGEKIMSDVIKKVHKKGEWKVLVVDKLSMRMMSSCCKMTDIMSEGITIVED
IGKKREPLPSMEAIYLITPNDETVEALIDDFRDPRSPRYRGAHVFFTDTIPDTLFNLLTK
SRASKAMKTLTEIHIAFLPYESQVFSLDKTDAFQDFYSPYKADIKRNMLERCAEQIATLC
NTLKEYPGIRYRGEYKDCATLAQLLQDKLDGYKADDPTMGEGPDKSRSQLLILDRGFDPV
SPILHELTLQAMGYDLLGIENDVYKYDTSGMGEVKEKAVLLDEDDDLWMSLRHKHIAEVT
TAVTRSLKEFSATKKMNTGEKTTMKDLSQMLKKMPQYQKELSKYSTHLHLAEDCMNHYQG
TVDKLCRVEQDLAMGTDAEGEKIKDPMRAIVPILLDKDVTVFDKIRIILLYIFMKNGVSE
ENLCKLLQHANIPPEDSDIIANMAHMGMPIITEGNPTRKVKKTDRKERVSEQTYQLSRWT
PLIKDIMEDAIEDKLDPKQYPYITQRTASTHSSAPSSARYGNWHKNKGPTEMKTGPRVII
FIIGGMTFSEMRCVYEVTQANGKWEAIIGSTHTLTPTKYLKELQHPDFLDPNAAPEEPEP
TPAE
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggcacccctcggactaaaagccattgtgggagaaaagattatgagtgatgtcatcaag
aaggtgcacaagaagggagaatggaaggttctggtagtagacaagctgagcatgaggatg
atgtcatcctgctgtaagatgacagatatcatgtcagagggcatcaccattgttgaagac
atcggcaagaagcgtgagcctctccccagtatggaggccatctacctcataactcccaat
gatgagactgtggaggcactcatagatgacttcagagatccgcggtcgcccagatacaga
ggagctcacgtcttcttcactgacacaatcccagatacattgttcaatctgttgacgaaa
tcccgtgcgtccaaagccatgaagaccttgactgagatccacatcgcctttctgccctat
gagtcacaggtgttttccctggacaagacagatgccttccaggacttctacagcccctac
aaggctgacatcaagcgcaacatgttggagcgttgtgctgagcagatcgccactctctgc
aacaccctgaaggaataccctggcatcagataccgaggggagtacaaagactgtgccact
ctggctcagctcctgcaggacaagctggacggctacaaggcagacgacccaaccatggga
gagggtccggacaagtctcgctcccagctcctgattctggaccgaggctttgacccagtc
tctcccatcctccacgagctcaccctccaagccatgggctatgacctgctgggcatcgag
aacgacgtctacaagtatgacaccagtgggatgggggaggtcaaggagaaggcagtgttg
ctggatgaggatgatgatctgtggatgagtctcagacacaagcacattgcagaagtcacc
acggctgtgacccgctccctcaaagaattctcagccaccaaaaagatgaacactggagag
aagaccacaatgaaagacttgtctcagatgctgaagaagatgccacagtatcagaaagag
ctaagcaagtactctacccacctccacttggctgaagactgtatgaaccactaccagggc
acggtggacaagctgtgtcgtgttgagcaggacctagcgatgggtacagatgcagagggg
gagaagatcaaggaccccatgagggccatcgtacccatcctgctggataaagacgtcacc
gtcttcgacaagatccgcatcatcctgctatacatcttcatgaagaatggtgtttcggag
gagaatctgtgtaagctcctccagcatgctaacatccctcctgaggacagtgacataatc
gccaacatggcccatatgggcatgcccatcatcacggaggggaacccgacccgcaaagtg
aaaaagactgaccggaaggagcgagtgagtgagcagacctaccagctctcccgatggacc
cctctcatcaaggacatcatggaggatgccattgaggacaaactggatccaaagcagtac
ccctacatcacccaacgcacagcatccacccacagcagcgctccatcaagtgcccggtac
ggtaactggcacaagaataagggccccacagagatgaagacaggtcccagagtcatcatc
ttcatcatcggaggcatgaccttcagcgagatgcgctgtgtctacgaggtcacacaagcc
aatggcaaatgggaggccatcattggttccacccacacactcactcccaccaaataccta
aaggagctgcagcaccctgacttcctggaccccaacgctgctcctgaagaaccagaacct
acccctgcagaatga
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