Coregonus clupeaformis (lake whitefish): 121585199
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Entry
121585199 CDS
T08357
Name
(RefSeq) potassium channel subfamily T member 1 isoform X1
KO
K04946
potassium channel subfamily T member 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121585199
Ion channels [BR:
cclu04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
121585199
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GFIT
Motif
Pfam:
Slo-like_RCK
BK_channel_a
Ion_trans_2
Ion_trans
Motif
Other DBs
NCBI-GeneID:
121585199
NCBI-ProteinID:
XP_041757559
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Position
16:57305129..57384628
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AA seq
1266 aa
AA seq
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MAVAKLTPSPSEIDPDVKTEATKTPEEPTWVNPSKPIRTMGSFGSDAGQRYQEEYSMDST
NAQVQVEFYVNENTFKERLKLFFIKNQRSSLRIRLFNFSLKLLTCALYVIRVALDDPEQV
TGVCVNCQNRTSTATAESTEITEINWDLIFWVNRRVPVWAIQVTVALISFLEAMLLTYLS
YKGNIWEQMFQISFILEMINTVPFIITIFWPPLRNIFIPVFLNCWLAKCALENMINDLHR
AIQRTHSAMFNQVLILICTLLCLVFTGACGIQHLERAGKNLTLFNSLYFCIVTFSTVGYG
DVTPHIWPSQLLVVILICVALVVLPLQFEELAYLWMERQKSGGNYSRHRAQTEKHAVLCV
SSLKIDLLMDFLNEFYAHPRLQDYYVVILCPTEMDIQVRRILQIPLWSQRVIYLQGSALK
DTDLMRAKMDDAEACFILSSRNEVDRTAADHQTILRAWAVKDFAPNCPLYVQILKPENKF
HVKFADHVVCEEEFKYAMLALNCVCPATSTLVTLLVHTSRGQEGQLSPEQWQRTYGRCSG
NEVYHIRLCDSKFFGEYDGKSFTYASFHAHKKYGVCLIGVKREDNKSILLNPGPRHIMAA
PDTCYYINITKEENSAFIFKQEEKDKKGLPVAGLYDAPSRLPVHSIIASMVDQATLYGTV
AMDLQHPADPPEDSSKLTLPTENGAGSRRPSIAPVLEIADSSSILPCDLLSDQSEDETNH
SDEEGSSVSDFVKGYPPNSPYIGSSPTLCHLLPQKASFCCLRLDKGCRHNSFEDAKAYGF
KNKLIIVSAETAGNGLYNFIVPLRAYYRPRKELNPIVLLLDYPPDNHFLEAICCFPMVYF
MAGTIDNLDNLLQCGIIYADNLVVVDKESTMSAEEDYMADAKTIVNVQTMFRLFPSLSII
TELTHPSNMRFMQFRAKDCYSLALSKLEKIERDKGSNLAFMFRLPFAAGRVFSISMLDTL
LYQSFVKDYMIPIARLLLGLDTTPGSGYLCAMKVTEEDLWIRTYGRLFQKLCSSSAEIPI
GIYRTESHMFSSSESQVSINVEDTGGDDQRDNRREKTAHRNSTTSDQSEHPLLRKKSLQW
ARRLSRKNTKPPSRTERISQQRLNLYRRSERQELSELVKNRMKHLGLPTVGYEDVANLTA
SDVMNRVNLGYLQELQGISEHLLREETRTGANTGGFGEADAPYPPTPKFEPHSVPDEMND
HQNTLSYVLINPPPDTMLELNDIVYIIRSDPLAGPDVPEDAAQGQSSGGGRMRQDFGTET
RDETHL
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atggctgtcgctaagctcacgccgtctccctcggagatagacccagacgtcaagaccgag
gcgacgaaaacaccggaggagccgacttgggtcaacccgtcgaagccgatacggacgatg
ggctcttttgggagtgatgctgggcaaaggtatcaggaggagtacagtatggactctacc
aacgcccaggtgcaggtggagttctatgtgaatgaaaacacctttaaggagaggctcaag
ctgttcttcatcaaaaaccaaaggtcaagcctgaggatccgtctgtttaacttctccttg
aagctgttgacgtgtgccctttatgtcatcagagtggctctggacgaccctgaacaggtc
actggagtatgtgtcaactgtcagaatagaacgagcacagccacagcagaatccacagaa
atcacagaaatcaactgggatttgattttctgggtgaacagaagggttcctgtctgggcg
atacaggtgaccgtggccttaatcagtttcctggaggctatgctcctcacatatctcagc
tacaaggggaatatctgggagcagatgttccagatctccttcatcctggagatgatcaat
accgtgccatttataattactatcttctggcctccattgagaaacatcttcatcccagtg
tttctcaactgttggttagccaagtgtgccctggagaatatgattaacgatctccatcgt
gccatccagaggacccactctgccatgttcaaccaggtcctcatacttatctgcaccctt
ctctgtctggtcttcaccggggcgtgtggtatccagcatctagagagggccgggaagaac
ctgactctgttcaactctctgtatttctgcatcgtcaccttctctacggtgggctatggt
gacgtcacacctcatatctggccttctcagctgctggtggtcattctgatctgtgtggcc
ctagtggtgctcccgctacagtttgaggagctggcctatctgtggatggagcgtcagaag
tcaggagggaactacagcagacaccgggcacagacagagaaacatgcggtcctgtgtgtc
agctctctgaagatagacttactcatggacttcctcaacgagttctacgctcatcctaga
ttacaggactactatgtggtgatcctatgccctacggagatggacatccaggtgcgtcgt
atcctccagatccccctgtggtcccagagggtcatctatctccagggctcagcgctcaaa
gacacagacctcatgagggccaagatggatgatgcagaagcctgttttatcctgagcagt
aggaatgaggtggaccgcactgctgctgaccaccagaccatactgagagcctgggctgtg
aaggactttgccccaaactgcccactgtacgtgcagatcctcaaaccagagaacaaattc
catgtaaagtttgctgatcatgtggtctgtgaggaggaattcaagtatgccatgctggct
ctgaactgtgtatgtccagccacatccacgctggtcacactcctagtgcacacctccaga
ggacaggagggccagctgtctccagagcagtggcagaggacatatggacgttgctctggg
aacgaggtctaccacattcgcctgtgtgacagcaagttcttcggggagtacgacgggaag
agtttcacctatgcctccttccacgcacacaaaaagtacggtgtgtgtctgatcggggtg
aagagggaagacaacaagagcatcctgctgaacccaggtcctcgccacatcatggccgcc
ccagacacctgctactacatcaacatcaccaaggaagagaactccgccttcatcttcaaa
caggaggagaaggacaagaagggcctgccggtggccgggctgtacgacgccccctccagg
ctgcctgtacacagcatcatcgccagcatggttgatcaggccactttgtatgggacggta
gccatggacctccagcacccggcggaccccccagaggacagcagtaagctgaccctgcct
acagagaacggggctgggagcagacgacccagcatcgcccccgtcctggagatagctgac
tcctcctccatcctgccctgcgacctgctcagcgaccaatcagaggacgagaccaaccac
tcagacgaggagggctcgtctgtgtcagactttgtgaaaggataccctcccaactcccca
tacattggcagctctccaaccctgtgccatctcctacctcagaaagcctcattctgctgc
cttcgcctggacaagggttgcagacacaacagttttgaggatgccaaggcctatggtttt
aagaacaagttgatcatagtatctgcagagacggcagggaacggcctctataacttcatc
gtccctctacgggcctactaccgccccagaaaagagctcaaccctatcgtactgctacta
gactacccgcctgacaaccacttcctagaagccatctgctgtttcccaatggtctacttc
atggctggaaccatagataacctggacaatctgctgcagtgtggcatcatctatgctgat
aacctggtggtggtggacaaggagagcaccatgagtgctgaggaggactatatggcagat
gccaagactatcgtcaacgtacagaccatgttcaggctgttccccagtctcagtatcatc
accgagctgacccacccctccaacatgaggtttatgcagttcagggctaaggactgttac
tccctggctctctccaaactagagaagatagagcgtgataagggttccaacctggccttt
atgttccgcctgccgttcgctgcaggcagagtgttcagtatcagtatgctggatacgttg
ctctaccagtcatttgtaaaggactatatgattcccatagcaagacttttactaggcctg
gataccacaccagggtctggttacctatgtgcgatgaaggtgacagaggaggacctgtgg
atcaggacgtatggcaggttattccaaaagctgtgttcttccagtgcagagattcctata
ggcatctaccgtacagagtcacacatgttctcctcctctgagtctcaagtatccatcaac
gtagaggacactggtggtgacgaccagagagacaaccgccgcgagaagacagctcaccgg
aactccaccaccagcgaccaatcagaacatccgttgctgaggaagaagagcctccagtgg
gcgcggcgtctgagccgtaagaacaccaagccaccgagtcgcaccgagcggatctcccag
cagcgcctcaacctgtaccggcgctccgagagacaggagctgtctgagctggtcaagaac
cgcatgaagcacctaggcctgcccactgtcggatacgaggatgttgctaatcttactgcg
agcgatgtcatgaaccgagtaaatctaggatatttacaagagttgcagggaatttcagag
catctgttaagagaggagaccagaacaggggcaaacacaggtgggtttggagaagcagat
gcaccttaccccccaacccccaagtttgagcctcattctgtcccagatgagatgaacgac
caccagaacactctgtcctacgttctcatcaacccccctccagacaccatgctggagctc
aatgacattgtgtacatcatccggtccgacccgctggcggggcccgacgtgcccgaggac
gcggcccagggtcagagcagcggcggcggccgaatgaggcaggactttggcacagagacc
agggatgagacccacctctga
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