Coregonus clupeaformis (lake whitefish): 121585204
Help
Entry
121585204 CDS
T08357
Name
(RefSeq) volume-regulated anion channel subunit LRRC8A
KO
K22038
volume-regulated anion channel
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121585204
Ion channels [BR:
cclu04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
121585204
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_4
LRR_14
LRR_5
LRR_1
LRR_LRWD1
LRR_At5g56370
LRR_6
Motif
Other DBs
NCBI-GeneID:
121585204
NCBI-ProteinID:
XP_041757572
LinkDB
All DBs
Position
16:56975832..56987239
Genome browser
AA seq
795 aa
AA seq
DB search
MIPITELRYFVDCQPAYRILKPWWDVFTDYISIVMLMIAVFGGTLQVTQDKMICLPCKWV
VNQTCRRYFNATLSAPLLLEPKGIQYNLDRHQYNYVDSVCYENRLHWFAKYFPYLVLLHT
LIFLACSNFWFKFPRTSSKLEHFVSILLKCFDSPWTTRALSETVVEESDPKPMKMNGSMD
KKVSCISEDVEASVPMLQRTKSRLEQGIVDRTETGVLDKKEGEQAKALFEKVKKFRIHVE
EGDIVYRLYIRQTIIKVIKFILIICYTGYYVHNIQFSVDCSVDIESLTGYSMYHCAHPLA
TLFKILACVYISLVGVYGLICMYTLCWMLRRSLKKYSFESIREESSYSDIPDVKNDFAFM
LHMIDQYDPLYSKRFAVFLSEVSENKLRQLNLNNEWTLDKLRQRITNNSQEKLELHLFML
SGIPDTVFDLIELEVLKLELIPDITIPPIIAQLVNLKEMWLYHTPAKIEAPALAFLRENL
KSLHIKFTDIKEIPLWIYSLKNLSELHLTGNLSAENNRYIVIDGLRELKRLKVLRLKSNL
TKLPQVVTDVGVHLQKLSVNNEGTKLIVLNSLKKMVNLTELELIRCDLERIPHSIFSLHN
LQEIDLKDNNLKTIEEIISFQHLHRLVCLKLWYNQIAYIPIQIGTLNNMERLYLNRNKID
KIPSQLFYCRKLRFLDLSHNNLTYIPADVGYLQNLQYLAVTANRIETLPNELFQCKKLRT
LNLGNNCLTSLPSRFGELTGLTQLELRGNRLECLPVELGECRQLKRSGLVVEEDLFNTLP
TEVKEQLWKVDKETA
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgatccccatcactgagctgcgttactttgtagactgtcagccggcctaccgtatcctg
aagccatggtgggacgtcttcactgactacatctccatagtcatgctcatgatcgccgtg
ttcgggggaacgctgcaggtcacccaggacaagatgatctgcctgccctgcaagtgggtg
gtcaaccagacctgcaggaggtatttcaacgccaccctgtcagccccgctgttgttggag
cccaaagggatccaatacaacctggatcgccaccagtacaactatgtagactccgtctgc
tacgagaaccgcctgcactggttcgccaagtacttcccctacctggtgctactccacacc
ctcatcttcctggcttgcagtaacttctggttcaagttcccccggactagctccaaactg
gagcactttgtgtcgattctcctgaagtgttttgactctccctggaccaccagggctctg
tctgagacggtggtggaggagagcgaccccaagccgatgaagatgaatggctcaatggat
aagaaggtgtcgtgtatcagcgaggatgtggaggctagcgtccccatgctccaaaggaca
aagtctcgcctggagcagggtattgtggatcgcactgagacaggggtcctggataagaaa
gaaggtgaacaggcaaaggccttgttcgaaaaagtgaagaagttccgcatacacgtggaa
gagggagacattgtgtacaggctctacatccgacagactattatcaaagtcattaagttc
attttgattatctgctatacagggtattatgtgcacaatattcagttcagcgtggactgt
agtgtggatatagagagcctcacggggtacagcatgtatcattgtgctcatcctctggcc
acgctgtttaaaatcctagcctgtgtctacatcagcttagtgggggtttacggcttaatt
tgcatgtataccctctgttggatgctacggcgctcgctgaagaaatactccttcgagtcg
atacgagaggagagcagttacagcgacataccggacgtaaagaatgactttgctttcatg
ctgcacatgatcgaccagtacgatccactgtactccaaacgctttgccgtcttcttgtct
gaagtgagcgagaacaagctgcggcagctcaacctgaacaacgagtggactctggacaaa
ctgaggcagaggatcaccaataactcccaggagaagctggagctgcacctgttcatgctg
agcggcatcccagacacagtgtttgatctgatagagctggaggtgctgaagctggagctc
atcccagacatcaccatccctcccatcatcgcccagctggtcaacctgaaggagatgtgg
ctgtaccacaccccggctaagatcgaggctccggccctggccttcctcagggagaacctt
aagtccctccacatcaagttcacggacatcaaggagatccctctgtggatctatagtttg
aagaacctgagcgagctgcacctgacggggaacctgagtgcagagaacaaccgatatatt
gttattgatgggctacgggagctgaagaggctcaaggtcctccggctgaagagcaacttg
accaagctacctcaggtggtgacggacgtgggggtgcacctccagaagctgtctgttaac
aacgagggcaccaagctgattgttctcaacagcctgaagaagatggtgaacctgactgaa
ctagagctgatacgctgtgatcttgagcgcatcccacactccatcttcagcctgcacaac
ctgcaggagattgacctcaaggacaacaacctgaagaccatcgaggagatcatcagcttc
cagcacctgcaccgtctagtctgccttaaactctggtacaaccagattgcctacattccc
atccagatcggcaccctcaacaacatggagaggctctatctgaacaggaacaagatcgat
aagatccccagtcagcttttctactgtcgtaagctacgcttcctggacctgagccacaac
aacctcacctacatcccagcagacgtggggtacctgcagaacctccagtacctggcagtc
acagccaacagaatcgagaccctgcccaacgagctgttccagtgtaagaagctccgtact
ctgaatctggggaacaactgcctgacatctctgccgtcgcgcttcggggagctgacgggg
ctgacccagctggagctgagggggaacaggctggagtgtctgcccgtggagctgggggag
tgcaggcagctgaagaggagcggcctggtggtagaggaggaccttttcaacaccctgccc
accgaggtgaaggagcagctgtggaaggtggacaaggagacggcctga
DBGET
integrated database retrieval system
