Coregonus clupeaformis (lake whitefish): 121585220
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Entry
121585220 CDS
T08357
Symbol
fbxw8
Name
(RefSeq) F-box/WD repeat-containing protein 8
KO
K10264
F-box and WD-40 domain protein 8
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121585220 (fbxw8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121585220 (fbxw8)
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
121585220 (fbxw8)
Cul7 complex
Target recognizing subunit
121585220 (fbxw8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box-like
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_SCAP
F-box
EIF3I
WDR55
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
Motif
Other DBs
NCBI-GeneID:
121585220
NCBI-ProteinID:
XP_041757596
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Position
16:55664483..55689479
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AA seq
659 aa
AA seq
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MAEDELQAFREHWKQELTNKNEAFSNCNVTGQPSREDSKLKRYFEDFGQNRSEPEKRQDS
TSQGSSKGGQDAVLSAAKTPKEDQPEYVSIAEGLLDGRTSPLLERIQEERTQRKRQYHSL
TNACNTSAQQQPQRKINKGDKLVDQFIQDLNETNDIPFFDIELPYELALKIFQYLSRTEL
GRCAQVSKAWGVLAEDEVLWFRMCLKEGYHHGASVSDSPCWKSTLRDCRNSENTVRSNWK
NRVGSVSQLQYELGKVLCDVSSCDSYVVAGYTSGDVRLWDTLHWDSAASFLKPSPLTADV
TPRPHVSHVRVNNTVAVAAYDDGCVDVWSTETGQEPVHHFQIPGRVHALALSLESPTLAT
AAGLDIRLDQPDDRGYWRTLCQATLPKPVESMVVVPGAVGRGGDSGPLVALSAGDTVYLL
APEDLEPRVLHTVYGHPITCLDASASHAALGVKSCGWAMNDGGNKIQVYSLETGQSEMSV
GNSAGDFSCVNLRDSPPHMLVCGNKDRRVRVFDLRTGSSVTSLYAHHMGVTSVQADDWKI
VSGGGEGLVCVWEMRMGAKLWEMHNRHPVRHVRFNTSTLVTANVPDEKSPRGACITDDDL
TAHRRHRGVICHYDFSEDSTSQDHVLPICRSNYVESSGYNYNIGLAVPYDILSGSHPSH
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagacgagcttcaggcgttcagagagcattggaagcaagaactgacgaataaa
aacgaggcattttcgaactgtaacgttactggtcaaccaagtcgagaagactctaaatta
aaacgatattttgaagattttggtcagaacagaagtgaaccagaaaaaagacaggattca
acatcacaggggagcagtaagggaggacaggatgcagttttgtctgcagcaaaaactcca
aaggaggaccaacccgagtatgtgtcgatagctgagggcttgctggatggaaggaccagt
cccttgttggagaggattcaggaggagaggactcaaaggaagagacaataccacagtctg
acaaacgcctgtaacacctccgcccaacaacaacctcagaggaaaataaacaagggggac
aaattagtggatcaattcattcaagacctgaatgagacaaatgacattcccttctttgac
attgagttgccctacgagttagccctgaagatcttccagtacctcagtcggacagagctg
gggcgatgtgctcaggtgagcaaggcgtggggggtcctggcggaggatgaggtgctatgg
tttaggatgtgtctgaaggagggttatcaccacggtgcctctgtctctgactccccctgc
tggaagagcacattacgagactgcaggaactctgagaacactgtgcgctccaactggaag
aatcgtgttggatcagtcagccaactgcagtacgagctggggaaagtattgtgtgatgtc
agttcctgtgacagctatgttgttgctgggtacacatcaggggacgtgagactgtgggac
accctccactgggactctgcagcctccttcctgaagcccagccccctgacggcagacgtc
acccccagacctcacgtcagtcacgtccgggtcaacaacactgtggctgtggctgcctac
gacgatggatgtgtggatgtgtggagcacagagacgggacaggagcccgtccaccacttc
cagatccctgggagggtccacgccctggctctgagcctggagagccccaccttggctact
gctgctgggctagacatccggctggaccagcctgatgacaggggctactggaggaccctc
tgccaggccacgctgcccaaacctgtggagtctatggtggtggtgccaggggccgtgggg
cgaggaggggacagtggccccctggtggccctgtctgctggggatacggtgtacctgctg
gcccctgaggacttggagccccgggtgctccacaccgtctacggccaccccatcacctgt
ctggatgcctcggcctctcacgctgccctgggggtcaagagctgtggctgggcaatgaac
gatggaggcaacaagatccaggtgtacagcctagagacgggccagtcggagatgtctgtg
gggaactcagcgggagacttctcctgtgtcaacctgagagacagccctcctcacatgctc
gtctgtggaaacaaagataggagggtgagggtgtttgacctgcgcaccggctcctctgtg
acatcactgtatgcccaccacatgggcgtgacctccgtgcaggcagacgattggaagatc
gtgagtggcggaggtgagggattggtctgcgtctgggagatgaggatgggagctaaactg
tgggagatgcacaacaggcacccagtcagacatgtgagattcaacactagcaccctggtg
acagccaacgtcccagacgagaagtctccacgaggggcctgcatcacagatgacgacctc
acagcccaccgcagacacaggggagtgatttgccactatgacttctcagaggactccacc
tcccaggaccatgttctgcccatctgcaggtccaactatgtggagtcatctggctacaac
tacaacatcggcctggctgtgccctatgacatcctgtctggctctcacccctcccactga
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