Coregonus clupeaformis (lake whitefish): 121585317
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Entry
121585317 CDS
T08357
Name
(RefSeq) gonadotropin-releasing hormone II receptor-like
KO
K04280
gonadotropin-releasing hormone receptor
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04080
Neuroactive ligand-receptor interaction
cclu04081
Hormone signaling
cclu04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121585317
04081 Hormone signaling
121585317
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
121585317
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cclu04030
]
121585317
G protein-coupled receptors [BR:
cclu04030
]
Rhodopsin family
Peptide
Gonadotropin-releasing hormone (GnRH)
121585317
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
DUF6264
Motif
Other DBs
NCBI-GeneID:
121585317
NCBI-ProteinID:
XP_045082558
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All DBs
Position
17:3847061..3855377
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AA seq
387 aa
AA seq
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MSEDRISGNWSLCSATPMFPPVNSSFNTSLPPSFTDWEAPTFTAAARVRVAATMVLFVFA
AFSNLSVLISVARGRGRRLAAHLRPLIASLASADLVMTFVVMPLDAAWNVTVQWYAGDAM
CKLLCFLKLFAMHSSAFILVVVSLDRYHAILHPLDALDAGRRNKRMLLVAWGLSLLLASP
QLFIFRAIKAEGVEFTQCVTHGSFHHRWQETAYNMFHFVTLYVFPLLVMSFCYTHILIEI
SRQMHKAKGGEHCLRRSGTDMIPKARMKTLKMTIVIVVSFVICWTPYYLLGIWYWFQPAM
LQETPEYVHHALFVFGNLNTCCDPVIYGFFTPSFRADLADVVACCCRCRSPNISPRSLDR
LACRRGRASGEAESDNPSGNQPSGNLG
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaagacaggatatcaggcaactggtctctttgttcggcgacaccaatgttccca
ccagtgaactcctcctttaacacctccctccctccgtcgttcacggactgggaggctcct
accttcaccgccgctgcccgcgtccgcgtggccgccaccatggtcctcttcgtgtttgct
gcgttctccaacctctcggtgctgatcagcgtggcacggggccgcgggcgccgcctggcc
gcccatctccggccactcattgccagcctggcctctgcagacctggtgatgacgtttgtg
gtgatgccgctggacgcggcgtggaacgtcaccgtacagtggtacgccggtgatgccatg
tgcaagctgctgtgcttcctcaagctgtttgccatgcactcgtctgccttcatcctggtg
gtggtcagcctggaccgctaccatgctattctgcacccgctggacgcactggacgccgga
cgcaggaacaagaggatgctgctggttgcctggggcctcagcttgctcctggcctcccca
cagctgttcatctttcgagcaatcaaagcagagggagtggaattcactcagtgtgtgacg
catggaagcttccaccatcgctggcaagagacggcctataacatgtttcactttgtcacg
ctttacgtgttccccctgttagtaatgagcttctgctacacccacatcctcatcgagatc
agccgtcagatgcacaaagccaaaggtggggagcattgcctgaggcgaagtggcaccgac
atgatccccaaagcgcgaatgaagaccctgaagatgaccatcgtgattgtggtgtccttc
gtgatctgctggacgccctattacctcctgggcatctggtactggttccagccggccatg
cttcaggagacgcccgagtacgtccaccacgcgcttttcgttttcggcaacctcaacaca
tgctgcgacccagtgatctacggcttcttcacgccctccttccgggctgacctggctgat
gtggtcgcatgctgctgccgctgccgatcgccaaacatctccccgaggtccctggaccgc
ctggcatgtcggaggggtagggcaagcggagaggcagagtctgacaatcccagtggcaac
cagccaagtggaaacctggggtag
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