Coregonus clupeaformis (lake whitefish): 121585342
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Entry
121585342 CDS
T08357
Name
(RefSeq) LOW QUALITY PROTEIN: thyroglobulin-like
KO
K10809
thyroglobulin
Organism
cclu
Coregonus clupeaformis (lake whitefish)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COesterase
Thyroglobulin_1
Ephrin_rec_like
TNFR_ELAPOR1_6th
Motif
Other DBs
NCBI-GeneID:
121585342
NCBI-ProteinID:
XP_041757657
LinkDB
All DBs
Position
17:25102834..25195592
Genome browser
AA seq
2524 aa
AA seq
DB search
MQIALMTEGGEKMRLVQISSILLCCLCLSEGKISEYQLESETLSQCESLRGVSSALQQNH
VPQCSEDGRFRHVQCSSGGGECWCVNAEGAEISGTRQNGSAVYCLTSCQLHRQQALLSGD
ASLVPQCQASGDYQAVQCDSAQGQCWCVDLEGMEIYGTRQNGKPSQCPGTCEVRSRRLLH
GIGERSPPQCSADGSFLSVQCKFVNTTDRMVLDLLHTFNRFPKVFQTFSSFRQMFPEVSS
YCFCADSRGRELPSTGVELLLDEVYDTAFSGLEPGRSFSQTNMYRILQRRFLAIQLAVSG
RFRCPSPCESESSADAQAGNVYVPSCDANGGYVPTQCQASGQCWCVDPTGKEIFGTRQHG
GSPDCGAGVKDCPAERRQALSRLLSSPTGQVTSAQDSQTHPGPLSPCSPQLQQLLLGSLT
ESLSERSDVGDILAEMIQGMFPSGAMALKALALSSNPKRLQENLFGGKFLENAGMFNFTG
AVGASGTLSFSQASLKNNQDLVKLVSTTLENKVFLSALRQTVLLSKAEDSTQLGELFRVL
FESAQSSSGGCERDPSALYVPSCDDNGQYQEIQCQGSECWCVDPQGQEVTGSRSKGQRPR
CPSRCERERAAAQKVKSGQAAGVQVFMPKCAEDGSYVALQCLGKSCFCLDLLGERHATIP
VGQTVQCPSPLSPLPSPGPAPGSCSLAVAEVDQFQEEAKRLVLLSNSSHVPLGYSYLLAE
GLRLTSDELLHALSSSDQTMLLSDRLLSHSHSALRLAAHSTLQFYWQSQQAASVKERQSL
LLGYQPYRPQCDAHRQWLPTQCHPSTGHCWCVDGEGGYIPGSLTSRSLQRPQCQTRCQRA
QAQALLSDWTQSSYDPTCEVSGQFSVLQKGSSGGGGAQCVSPVSGETIQPATLKRYYFKT
HLPLCPPCGSLGPSWCQLLKDSGQSVVGYEPACQVDGRLFSPLQCDQTDCWCVSQTDGQE
LPQTRTPRSMGKTPACDSPQCPSPFSDIIVTHGDVVCRSDVIGGQQNCDLICHLGYESTL
PVNMQLLCDVATRAWVTEAPLPQACQRLQVLQTVQTSVVLQLALTPGQEPCRSSLHSSLQ
ISLLHDMRAKGLCSLQLTFSSVSVCDESSVSVECVGEESLSVQVSWKALLSDLPVSALPD
LHDVDVVLSKDRLLDGLLGLMGSEPYRSLLTSEPRVLSTSAPGFGCSHGYQRVGTGCVVC
PAGTFSSGGVCSPCPQGSYQDQEGTDFCTMCPKGTSANGASIATHCLTECQRSGLRCSEG
GDFLSAQQDIQTRRWRCVTSSGEQLEWTTSGQPLSEGECSVLGRFETVPRSAFSLAAEDY
VVLSSETSDMAMENQLRTCVSACAQVQACLYVVLYTEEGQTHCELYSTDAANIQCETSEE
TKGFLGNPGADMFQSLSCSLKVNGADRQNVTVIRKKGHEFTTKAQKTFERLSFRKASSGV
YRTMVFAAEGTTLTDVHSFCQDECTRNTCCDGFILNQNVLNGGTIMCGLLSYPDMLLCSE
ADWDMSGLAKASRICGAGVTYNKLQKQFLFNFGGQDFTITDTALPTSSKNKTDYQATIIV
FQGIYLWKESDMTTRSKTSPACSSVLPQQAPKVLLSDAVKETFVSLDSSAVVVDSERDIP
SLQYWIFKHQFSAQEAQLWCLKRCEEEELCHVADVRDESSVYFTCTLYPDTQVCGAYDKP
LRQACSPVLPQQPHTAHTKKVDLTGSVESFYSRVPFKKMVSYSVRSRVNLSAKPITEGFR
ECERRCDEDPCCRGIGYVRDTQSPGSDILCLTLNSFGIQTCGEGERTTWRVQDCTPPKVE
TGVYPLGWYEKPVNQWTKSPRLCPRFELRVPSKNVSLSEWRLLDASSTLVDSSVSTFDII
HISKDIAEDLDRTRDWCLSACEEAESCAVVSVERTDSAVRCVLYPDTLACAPSTSTPTGG
QDCRLVIRESALQVYLHKELKAELTSVFIPAHGTLQGEAVTTPLGSDRKTVRQFLGVPYA
RPPIRALRFAPPQPAEWSGTWNAMITRPSCLQPGAVESSATSEDCLYLNIFVPSGIVRSA
AVLVFFHNPSGAASHDTPSLLDGSYLAAVGNIVVVTVNTRVSAFGFLSTGSTALPGNTGL
QDQVAALKWVQENIEAFGGDPRLVTVGAERSGADVASLHLTSPSSRGLFNRMLLMGGSVF
SPASVLSVSKAQVQAEALARELGCPPSDPEQLASCLRAAPAQDLNAAQTKLLSVSGPLQA
WGPVVDGVSVQGKPSMALMNALSHRADLLLGSSAEDGLISRAKRIKNFEELQGRADSKTA
FYEALSNSLGGDDANAFVKAAATWFYSMQHSPSPAGYNVFSQALNNATRDLFIVCPTIKM
ANFWAANSRSNVFMYHLPEDTAQTSADLSVPLDVQYVFGLPHSPLTYNLFTNTERRLSLQ
MMTYIANFIKSGDPNQAHRVSRVAFSEAALPPWHAFQPHPDGDSYMEVEPGLSNHRGLRR
AQCSFWADYISALTASTGKLSSAVSEGESAGLGAGAPTPETKLFADFLTTVTQSKPKSEK
DAYN
NT seq
7575 nt
NT seq
+upstream
nt +downstream
nt
atgcagatagcactgatgacagaaggaggtgagaagatgaggctggttcagatctcctcc
atactgctgtgctgcctctgtctgtctgaggggaagatttcagaataccagctggagtct
gagaccctgagtcagtgtgagtcgctacgtggtgttagttctgccctgcaacaaaaccat
gtcccccagtgctcagaggacgggaggttcagacacgtccagtgcagtagtggtggtggt
gagtgctggtgtgtgaacgctgagggagctgagatctctggaaccagacagaacggatca
gctgtgtactgtctgacgtcctgccagctccacagacagcaggccctgctgagtggcgat
gcctccctggtgccccagtgccaggcctctggggactaccaggctgtgcagtgtgacagc
gcccagggacagtgctggtgtgtagacctggagggcatggagatctacgggacccggcag
aacggaaagccctctcaatgcccaggcacctgtgaggtgaggtcgaggcgtctcctccac
ggcatcggggagcgctccccccctcagtgctcggccgacggctccttcctgtccgtgcag
tgcaagtttgtcaacaccactgacaggatggtcttggacctgctgcacactttcaacagg
ttccctaaagtattccagacgttcagcagcttcagacagatgttccctgaggtgtccagt
tactgtttctgtgctgacagcagaggcagggagctccccagcacaggtgtggagctgctg
ctagatgaggtgtatgacacagccttctcaggtctggagccaggccgctccttctcccag
accaacatgtaccgcatcctacagaggagattcctggccatccagctggctgtgagtggc
aggttcagatgccccagcccttgtgagagcgagtcatccgctgatgcccaagctggcaat
gtgtatgtgccatcctgtgatgccaatggtggttacgtgccaacccagtgccaggcgagt
gggcagtgctggtgtgtggaccccacagggaaggagatctttgggacacgacaacatgga
ggatcccctgactgtggtgctggagtgaaggactgtcccgctgagcgtcgccaggccctc
tccaggctcctctccagccccacaggtcaggtgacctcagcccaggactcacagacacac
ccaggccccctgtctccctgcagcccccaactccaacagctcctgctggggtctcttaca
gagtccctttccgagcgatccgatgtaggagacatcctggctgagatgatccaggggatg
ttccctagcggggccatggccctcaaggccctagctctgtcctccaaccccaagagactc
caggagaacctgttcggaggaaagttcttagaaaacgctgggatgttcaacttcactggg
gccgtcggggccagcggcacgttgagtttcagtcaagccagtctgaaaaacaaccaagat
ctagttaagctcgtcagcaccaccctagaaaacaaagtcttcctctccgccctacgccaa
accgtcctcttatccaaagccgaggacagcacccagctaggtgagctcttcagggtcctg
tttgagagcgcccagtccagcagcggtggttgtgagagggacccctctgccctgtacgtg
cccagctgtgatgacaacggacagtatcaggagatccagtgccaaggctcagagtgttgg
tgtgttgacccccagggtcaggaggtcacggggtcacgctccaaaggtcaaaggccaagg
tgtccgtcacgatgcgagagggagcgagcggctgcccagaaggtgaagtcaggccaggct
gcgggggtacaggtgttcatgccgaagtgtgcggaggacgggagctacgtggcgttgcag
tgtctgggaaagagttgcttctgtctggacctcctgggagagcgacacgccactatccct
gtaggacagactgttcagtgtccttcccctctctctccccttccctccccagggccagct
ccaggctcctgttccctggcggtggctgaggtggaccagttccaggaggaggctaagcgt
ctggtcctcctctccaacagctcccacgtccctctgggctacagctacctgctggctgaa
ggccttcgtctgacctctgacgagctactgcacgccctctcctcctccgaccagaccatg
ctgctctctgataggctgctgagccactcccactctgctctacgactggctgcccactcc
accctgcagttctattggcagagccagcaggcagcatctgtgaaggagagacagtctcta
ctgctgggctaccagccctacaggccccagtgtgatgcccacagacagtggctgcccacc
cagtgccaccccagcacaggtcattgctggtgtgtggatggggaaggaggatatatccca
ggatccctgaccagtcgctccctgcagagaccacagtgccagacccggtgtcagagagct
caggctcaggctctgctctctgattggacacagtcctcctacgacccgacttgtgaagtg
agtggccagttctctgtgctccagaaggggtcttcaggtggaggtggagcccagtgtgtc
agtcctgtgtctggggaaaccatccagcctgctaccctgaaacggtattattttaaaacc
catctccccctctgtcccccatgtggctctctaggtcctagctggtgccagttgttgaaa
gacagcggtcagtctgtggtgggttatgagccggcgtgccaggtggatggaaggctgttc
tccccgctgcagtgtgaccagacagactgctggtgtgtgtctcagacagacggacaggag
ctgcctcaaaccaggaccccacgcagcatggggaagaccccagcctgtgacagtccccag
tgtccctctccgttctcggacatcatcgttacccacggtgacgtggtctgtcgctctgac
gtgattggtggccagcagaactgtgacctcatctgtcacctgggttacgaaagcaccctt
cctgttaacatgcagttactgtgtgacgtggcgaccagagcctgggtgacagaggcccca
cttcctcaagcctgccagagacttcaggtgctgcagaccgtccagacctctgtggtgctc
cagctcgccctgactccgggtcaggaaccctgcagatcctcccttcactccagcctgcag
atctctctgctccacgacatgagggccaagggcctctgcagcctgcagctgaccttcagc
tctgtgtcagtgtgtgatgagtcgtctgtctctgtggagtgtgtgggggaggaaagtctc
agtgttcaggtcagctggaaggctcttctctcagaccttcctgtctctgctctgcctgac
ctgcatgatgtagatgtggtgctcagtaaggacaggctgttggatgggctgctaggcctg
atgggtagtgagccctaccgctccctcttgacctctgaacccagagtcctctctacctca
gcacccggcttcggctgctcccatggctaccagcgtgttgggacaggatgtgtggtgtgt
cctgcgggtacgttttccagtggaggtgtttgttctccctgtcctcagggctcctaccaa
gaccaggaggggacagacttctgtaccatgtgtcctaaaggcacctccgcaaacggagcc
tccattgccacacactgtttgacagagtgccagcgcagtggcctgaggtgttcagaggga
ggggacttcctgtcagcccagcaggacatccagaccaggaggtggcgctgtgtgacgtcc
agcggagagcagctggagtggacaacctctggccagcctctgtctgagggagaatgttcc
gttctggggaggtttgagacagttcccagatcagcgttctctctagcagcagaagactat
gttgtcctcagctcagagacatcagacatggccatggagaaccaactcaggacgtgtgtg
tcagcttgtgcccaggtccaggcttgtctttacgttgtcctatacacagaagaaggacaa
actcactgtgaactctacagcaccgacgctgctaacatccagtgtgaaacctctgaggaa
accaaagggttcctgggaaatccaggtgctgatatgttccagagcctgagctgttctctg
aaggtgaacggggctgacagacagaacgtcacggtcatcaggaagaaaggtcatgaattc
accactaaggcccagaagacctttgaaaggctgagtttccgtaaggccagttctggtgtg
taccgtacaatggtgtttgcagctgaaggaaccactctgaccgacgtccatagtttctgt
caggatgagtgtacccggaacacctgctgtgatggcttcatcctcaaccagaacgttctc
aatggaggtaccattatgtgtggtctgctgagctacccagacatgttgctatgcagtgag
gcagactgggacatgtctggcctggccaaggctagcagaatctgtggggctggagtcacc
tacaataaactgcagaaacagttcctctttaactttggaggacaagacttcaccatcacc
gatacagctctgccaacatcaagcaagaacaaaactgactaccaggccaccattattgtg
ttccaaggcatttacctctggaaagagtctgacatgaccactcgttccaagacctcccca
gcctgtagcagtgtcctcccacaacaagcccccaaagtccttctgtcagatgcagtgaag
gagacgtttgtgtccctggacagcagtgctgttgttgtggactctgaacgggacatcccc
agcctgcaatactggatcttcaaacatcagttctctgcacaggaggctcagctgtggtgt
ctgaaacgctgtgaggaggaggagctgtgtcacgtggctgatgtgagagatgagagctca
gtgtactttacctgcacactgtacccagacacccaggtgtgtggggcctacgacaaaccc
ctgagacaggcctgcagccctgtgctcccccaacaaccccacactgctcacaccaagaag
gttgatctgactggaagtgtggagagtttctacagccgtgttccctttaagaagatggtg
tcttattccgtccgtagccgtgtcaacctgagtgccaagcctatcactgaggggttccgg
gaatgtgagcggagatgtgatgaagacccgtgttgccgtggaatcggatacgtcagggac
acccaatcacctggatcagacattctctgcttgactctgaacagctttggcatccagacg
tgtggtgaaggtgagaggacaacctggagggtccaggactgcaccccccccaaagtagaa
accggggtgtatccgctcggctggtacgagaaaccagtgaatcagtggactaaatctcca
agattgtgcccccgtttcgaactacgtgttccttcaaagaatgtgagtttgagtgagtgg
agactcctggatgcgtcctctactctggtggattcatctgtctccacgtttgacattatt
cacatcagtaaagacatcgctgaggacctggacaggaccagagactggtgtctgtctgcg
tgtgaggaggctgagtcctgtgctgtggtgtcagtggagcggaccgactcggctgtccgc
tgtgtcctctacccagacaccctggcctgtgccccctccacttccacccccactggaggt
caggactgtcggctggtcatcagagagtcagctctccaggtctacctccacaaagaactg
aaggcagagttgacgtcggtgtttatcccggctcacggaacgctccagggagaggccgtg
acaacgccgctcgggtcagacaggaagacagtcagacagttcttgggagttccgtacgct
cgtcctcctatcagagccctccgtttcgcccccccacagcctgctgaatggagtggcaca
tggaacgccatgattaccagacccagttgtctgcagcctggagctgtagagtcatcagcc
accagtgaggactgtctgtacctcaacatcttcgtccccagtggcatcgtaaggagtgca
gcggtcctggtgttcttccataacccgtctggagcagccagccatgacacaccatctcta
ctggacggctcctacctggctgccgttggcaacatcgtcgtggttaccgtcaacaccagg
gtttcagcattcggattcctcagcacaggctccacagccctgccaggtaacactggtctc
caggaccaggtagcagctctgaagtgggtccaggagaacattgaggcgttcggaggtgac
cccaggctggtgacggtgggggcagagcggagcggagccgatgtggccagcctccatctg
acctctccctcctcacgtggtctcttcaacaggatgctgctcatgggtggctctgtgttc
tcccctgcctcagtgctgagtgtatccaaggcccaggtgcaggctgaggctctggcccgg
gagctgggctgtcccccctctgacccagaacagctggcctcctgcctgagagcagcacca
gcacaggacctcaacgctgctcagaccaagttgctgtcagtcagtgggcccctgcaggcc
tggggtccagtggtggatggggtctctgtccaggggaaaccctccatggccctgatgaat
gcactctcccacagagctgacctcctgctgggctcctccgcagaggatggactcatcagc
agggccaagaggatcaagaactttgaggagctccaggggcgagctgacagtaaaacagcg
ttctacgaagccctgtccaactctctgggtggagacgatgccaatgcttttgtgaaggct
gcagctacctggttctactctatgcagcactctccctctcctgctggttacaatgtcttc
tctcaggctcttaacaatgcaaccagagatctcttcattgtgtgccccaccataaagatg
gccaacttctgggcagctaactccagatccaatgtgttcatgtatcacctgcctgaggac
actgcccagaccagtgctgacctgtcagtgcccctggatgtccagtatgtgtttggtctc
ccccacagccccctgacctacaacctgttcaccaacacagagagacgcctctccctgcag
atgatgacctacattgccaacttcatcaagtccggagatcccaaccaggctcacagagtg
tcccgcgtggccttcagcgaggcggcactgcccccctggcatgccttccagccccaccct
gatggggacagctacatggaggtggagccaggcctcagtaaccacaggggcctccgcagg
gcccagtgctccttctgggccgactacatctccgctctgaccgcctccactggcaaactt
tcatctgctgtgtcggagggggaatctgctggtttgggggctggcgcgccaacaccagag
accaagttatttgctgatttcctgacaactgtcacccagagcaaacccaagtcagagaag
gatgcttataattag
DBGET
integrated database retrieval system
