Coregonus clupeaformis (lake whitefish): 121585427
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Entry
121585427 CDS
T08357
Name
(RefSeq) E3 SUMO-protein ligase NSE2-like
KO
K22756
E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121585427
03400 DNA repair and recombination proteins [BR:
cclu03400
]
121585427
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
121585427
DNA repair and recombination proteins [BR:
cclu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
121585427
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
zf-Nse
zf-RING_UBOX
zf-MIZ
Motif
Other DBs
NCBI-GeneID:
121585427
NCBI-ProteinID:
XP_041757707
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Position
17:14018794..14026946
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AA seq
224 aa
AA seq
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MSLSAVHSTLSSLKTCQPDIGTGMDIVTDVALDVAETAGTENDAVLKKLDLMMLECAKLD
REINCFVEVVDYVTAEVRNQEPEAMFRLKSLVKEKFTETHGRLSEGELQNHVKLVSFKES
VRNTLKTMNPEAAENMEEELDEDIAVTQSEVNFTCPLTQVEMVNPMKNKKCNHHYDRDAI
MGMISARQSQKKKLRCPVVGCGNMDVKQGDLILDQIMKRQIQKR
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgtccttgagtgcagtccactccacgctgtctagtctgaaaacatgtcagccagatatt
ggaactgggatggacattgtgacagacgttgcgctggatgtggcagaaacagcaggaact
gagaatgatgcagtcctgaagaagctagacttgatgatgctggagtgtgccaaactggac
cgggagatcaactgcttcgttgaggtggtggactatgtcactgcagaggtgaggaaccag
gaacctgaggccatgttcagactgaagtctttggtgaaggagaagttcactgagacacac
ggcagactgtctgaaggagaactacagaaccacgtcaagctggtcagctttaaggagagc
gtcagaaacacactcaaaacaatgaaccctgaggcagcagagaatatggaggaggagctg
gatgaggacattgctgtgacgcagagtgaggttaacttcacctgtcccctcactcaggtg
gagatggtgaacccaatgaagaacaaaaagtgtaaccaccactacgaccgggacgccatt
atggggatgatcagcgccaggcaaagccagaagaagaagttacgctgtccggtggttggc
tgtggcaacatggacgtgaagcagggagacctgatcctagatcagattatgaagagacag
atccagaagaggtag
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