Coregonus clupeaformis (lake whitefish): 121585479
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Entry
121585479 CDS
T08357
Name
(RefSeq) partitioning defective 6 homolog gamma-like
KO
K06093
partitioning defective protein 6
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
cclu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121585479
09144 Cellular community - eukaryotes
04530 Tight junction
121585479
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121585479
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
121585479
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PB1
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
121585479
NCBI-ProteinID:
XP_041757757
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Position
17:complement(25366124..25369784)
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AA seq
441 aa
AA seq
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MNRSLSKSQSSLQYCATVEVKSKYGAEFRRFSLNRSNPGEFQDFYKLLLRLHHLTSIDVM
IGYADIQGELLPINNDDNFCKAVSTAPTLLRIFIQRQEEVDYNNFCPNATVTRRRKVPVI
PLPRGNMNRKRPTVHISRPQDFRPISSIIDTDFLPASQRRVRLYRQGSEKPLGFYIRDGT
TVKVTPHGLEKVPGIFISRLVPGGLAESTGLLAINDQVLEVNGIEVMGKVLDQVTDMMIA
NSHNLIITVKPVNQRNNIVRTGSWMSGINSGSVSSLDYQSYHSMPICQSHHSMPICVGAY
SFTDDELQSDEDLDIVIERRLRNSSHRSSASTSTASRSQAWSQPQQSPRPSPRPSSRRPP
RRPYSVISSTSYHSQPSLTNLNLRLNRDLTLQQHYGSSPVIREMNGGVFNHSSLLTLRTE
LRRSLVLQRGGVEEDGMVITL
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgaatcggagcttaagtaaatcgcagtcttctttgcagtattgtgcgacagtggaagtg
aaaagcaaatatggagcagagttcagaaggttttcccttaaccgctccaaccctggggag
ttccaagatttctacaagctcctcctgcgcctgcaccatctaaccagcattgatgtcatg
attggctatgcagatatccagggagagctactacccatcaataacgatgacaacttctgc
aaggccgtgtccactgctcccaccttactgcggatcttcatacagagacaagaggaagtg
gactacaacaacttctgccccaatgccactgtgacacgccggaggaaggtgccagtgatc
cctctcccacgcggcaacatgaaccgcaaaaggccaacggtccacatcagcaggccgcag
gacttccgtcccatctcgtccattattgacacggacttcctgcccgcatctcagcgccgg
gtacgcctgtaccgccagggctcagagaagcccctggggttctatatccgggatgggacc
actgtgaaggtgactccccacggcctggagaaggtccctgggatcttcatctcacggctg
gtccctggaggcctggctgagagcacagggctgctggccatcaacgaccaggtgcttgag
gtgaatgggatcgaggtgatgggcaaagtgttagaccaggtgacagacatgatgatcgca
aacagtcacaatcttatcatcacggtgaagccggtgaaccagcgtaataacatagtgcgt
accggcagctggatgtcggggataaactcaggcagtgtcagctctttagactaccagagt
taccacagcatgcccatctgtcagagtcaccacagcatgcccatctgtgtgggagcctac
agcttcactgatgacgagctgcagagcgacgaggacttggacattgtgattgagagaaga
ctcagaaactcatcccatcgctccagtgcctccacctccacagcctcccgttcccaggct
tggtcccagccccagcagagtcctaggccttctcccagaccatcctcccggcgccctccc
cgtcggccttactctgtcatctcctcaacctcctatcactcacagcccagcctcactaac
ctgaacctcagactgaacagagacctgaccctgcagcagcactacggcagcagcccagtc
atcagggagatgaacggaggtgtgtttaaccacagcagcctgctcaccctgaggacagag
ctacgacgtagcctggtgctacagaggggaggggtggaggaggacggaatggtcatcacc
ttatga
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