Coregonus clupeaformis (lake whitefish): 121585522
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Entry
121585522 CDS
T08357
Symbol
gdf6b
Name
(RefSeq) growth/differentiation factor 6-B
KO
K20012
growth differentiation factor 6
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04060
Cytokine-cytokine receptor interaction
cclu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
121585522 (gdf6b)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
121585522 (gdf6b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cclu04052
]
121585522 (gdf6b)
Cytokines and neuropeptides [BR:
cclu04052
]
Cytokines
Transforming growth factors (RSTK binding)
121585522 (gdf6b)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Motif
Other DBs
NCBI-GeneID:
121585522
NCBI-ProteinID:
XP_041757788
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Position
17:complement(32107980..32111314)
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AA seq
417 aa
AA seq
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MDFYQITTFYAVLTCAWDLPCFQSFTIFLPSASKSSKVPKGFDVQEAKYFKDIYSSSSSS
SSNERHYKGGLKDSIEPHDYMLSIYKTFSTAEKLGLNASFFRSSKVANTIASFVDIGQDD
LPLSPLRRQQYLFDVSTLSDRAEVLGAELRIYTKVSGNFRMSETEPVEIQLLSCRSQQLL
DSRALDLQESHRPRWEVLDVWEIFKDRDHLTQGSQFCLEVKAMLDNPERELDLHHLGFHR
NGRSQQKKAILVVFTRSKKRQTLFSERRERRTLMGPGEKGKERDPRSNSKASRRRRMVIL
KNRHGKRHGKKSKSRCSKKPLHVNFRELGWDDWIIAPLDYEAYHCEGVCDFPLRSHLEPT
NHAIIQTLMNSMNPSNMPPSCCAPSKLSPISILYIDSGNNVVYKQYEDMVVESCGCR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggatttctatcaaataaccacattttacgcggtcctcacatgtgcatgggatttacca
tgttttcagtcatttactattttccttccgtctgcctcaaagagcagcaaggtgccgaag
ggatttgatgtacaagaggcaaaatatttcaaagatatctactcatcctcatcatcatcc
tcatcgaatgagcggcattacaagggtggtctcaaagattcaattgaaccacacgactac
atgctttcaatttataagactttctctacagccgaaaaattggggctaaacgcaagtttc
tttaggtcatcaaaagtagctaacactatagcaagttttgtggatatcggacaagatgac
ctcccactctcccctttgcgaagacagcagtatctgtttgacgtctcaaccctttcagac
agagccgaggtgctgggggctgagctgaggatatacaccaaagtgtctgggaatttcagg
atgtcggaaacagagccagtggaaattcagctactctcctgccgctctcagcagctgctg
gattccagagcgttggatcttcaggagtcccatcggcccagatgggaggtgttggatgtg
tgggaaatatttaaggacagggatcacctcacacaggggagccagttctgtctggaggtc
aaggccatgctggacaaccctgagagggagcttgacttgcatcatctgggctttcaccga
aatggtcgctcacagcaaaagaaggcaattttagtggtgttcaccaggtccaagaagaga
cagacccttttcagcgaaaggagagaaagaaggacattgatgggccctggggaaaagggg
aaagagagggaccctcgttctaattccaaagccagccggagacgcaggatggtgatattg
aagaatcgccacgggaagaggcatggcaaaaagtcaaaatcgagatgcagcaagaagccg
ttgcacgtgaacttcagagagttgggctgggacgattggatcatcgctcctctggattac
gaggcgtaccactgtgagggcgtgtgtgactttcctctgaggtcacatctagagcccaca
aaccatgccatcatccagacccttatgaattctatgaaccccagcaacatgcctcctagc
tgctgtgccccgtccaaactcagccctatcagtattctctacatcgactcaggaaataat
gtggtgtataagcagtatgaggacatggtggttgagtcgtgtggttgtaggtaa
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