KEGG   Coregonus clupeaformis (lake whitefish): 121585542
Entry
121585542         CDS       T08357                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115
  KO
K11982  E3 ubiquitin-protein ligase RNF115/126 [EC:2.3.2.27]
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cclu04131]
    121585542
   04121 Ubiquitin system [BR:cclu04121]
    121585542
Enzymes [BR:cclu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     121585542
Membrane trafficking [BR:cclu04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab associated proteins
    121585542
Ubiquitin system [BR:cclu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    121585542
SSDB
Motif
Pfam: zf-RING_2 zf-C3HC4_2 zf-C3HC4 zf-RING_11 zf-rbx1 zf-RING_UBOX zf-ANAPC11 Zn_ribbon_19 zf-RING_5 HypA DUF7560 zf-C3HC4_3 FAR1_N
Other DBs
NCBI-GeneID: 121585542
NCBI-ProteinID: XP_041757801
LinkDB
Position
17
AA seq 302 aa
MAEAAATPQYRFFCHCCKGEIDPKLPEFTCPRCESDFIEEVTEDSSLLENSSTAEANDDA
GTLFSELWQLLFMERSALLLDPSASESDQSHLQAAVASDAVEEDVEGPSEVPVASVGGTE
PLVPEPERPSRPPSQGRRQSRTPAVEGIVQQFLAGLFANDGNPGIAPAALYGMLHSNPGD
YAWGQGGLDAVITELLGQFEGTGPPPAEKEMISSLPTVNISQEQTDSRLECPVCREEYSV
GESVKQLPCLHHFHSDCIVPWLELHDTCPVCRKSLDGVDQSIQPPPEPPSIRTDPQEEKQ
AI
NT seq 909 nt   +upstreamnt  +downstreamnt
atggcggaggctgcggcgacaccacaataccgttttttctgtcactgctgtaaaggtgaa
atcgaccctaaactcccggaattcacatgccccaggtgtgagtccgatttcattgaggag
gtgacagaagactccagtctcttggagaacagcagcactgcagaggccaatgatgatgca
ggcacactcttttcagagctgtggcagctgctgtttatggaacgctctgcccttctcttg
gacccctccgcctctgagtctgaccagagccatctacaggctgccgtagccagtgatgca
gtggaggaagacgtggagggcccttccgaagtgcctgtggcctctgtgggaggcacagag
cctttagtgcctgaaccggaacgcccatctcgtccgcctagccaggggaggcgacagtcc
cgcacgccagcagtggagggtattgtgcagcagtttttggctggtctgtttgccaacgat
ggaaatccaggcatcgcaccagctgcactgtatggcatgctccattcaaatccaggggac
tatgcctggggtcagggaggtctagacgcagttatcacagagttgttaggtcagtttgag
ggcacaggtccacctcctgcagagaaggagatgatatcatccctccccacagtcaacatc
tctcaagaacagacagacagcagactggagtgtccagtatgtagggaggagtactccgtg
ggagagtctgtcaaacagctgccctgcctccatcatttccacagtgactgcatagtgcca
tggctcgaactgcacgatacctgtcctgtgtgtcgtaaaagtcttgacggcgtcgaccag
agcatccagcccccaccagaacccccctccatcaggacagaccctcaggaggagaaacag
gctatttga

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