Coregonus clupeaformis (lake whitefish): 121585572
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Entry
121585572 CDS
T08357
Name
(RefSeq) voltage-dependent calcium channel gamma-7 subunit
KO
K04872
voltage-dependent calcium channel gamma-7
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04010
MAPK signaling pathway
cclu04260
Cardiac muscle contraction
cclu04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121585572
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
121585572
04261 Adrenergic signaling in cardiomyocytes
121585572
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121585572
Ion channels [BR:
cclu04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
121585572
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GFIT
Motif
Pfam:
Claudin_2
PMP22_Claudin
DUF716
Amastin
SUR7
L_HMGIC_fpl
DUF7475
DUF4064
Motif
Other DBs
NCBI-GeneID:
121585572
NCBI-ProteinID:
XP_041757831
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Position
17:41561309..41592089
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AA seq
350 aa
AA seq
DB search
MSMFSTRALTLLSSVFGACGLLLVGVAVSTDYWLLMEEGVILQQNQSMEVRMALHSGMWR
VCFVAGPEKGRCVASEYFTTEAEIDIVTENTANILKMVRTATPFPMVSLLFVFTAFVISN
IGHIRPQRTILAFISGIFFILSGLSLVVGLVLYISSINDEVMNRPREPEHFFHYHYGWSF
AFAASSFLLKEGAGVMSVYLFMKRYAEEEMYRPHPSLYRPRLSECSDYSGQYLHPESWPP
PKRGRSASEVSSDISIQLNQTPPPPPPKGSSLQQQAPSSGPSSGASYQQSSSSSSYPHHT
MSSHPLHSSHHTMSSHPSGPPPQCMPMAMPPSAQPPPRYHQHMRMSASPC
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgagcatgttcagcacgcgggcactcacactcctgtcctctgtgtttggggcgtgcggc
ctgctcctggttggcgtggctgtgtccacagactactggctgctgatggaagagggtgtc
attctgcagcagaaccagagcatggaggtcaggatggccctgcactccggcatgtggagg
gtctgcttcgtggcaggacctgaaaaggggagatgtgtagcatcagaatacttcaccact
gaagctgagatagatatcgtgaccgaaaacactgcaaatatactaaagatggtacggacg
gccacaccgttccccatggtttcgctgcttttcgtcttcaccgccttcgtcatcagtaac
atcggacacatccggccccagcgcaccatcctggccttcatctctggaatcttcttcatc
ctctcagggctcagcctggtggtgggcctggtcctctacatcagcagcatcaatgacgag
gtgatgaaccggccgcgtgagccagagcacttcttccactaccactacggctggtccttc
gccttcgctgccagctccttcctcctcaaagagggggccggggtgatgtcagtgtacctc
ttcatgaagcgctatgccgaggaggagatgtaccggccccacccatccctctaccgcccc
cgcctgtccgagtgcagcgactacagcggccagtaccttcaccctgagtcgtggcctcct
ccgaagcggggccgcagcgcgtctgaagtatccagcgacatctccatccagctgaaccag
acgcccccgcccccgccgcccaagggcagctccctgcagcagcaggccccgtcctctggc
ccttcctcgggcgccagctaccagcagtcctcctcctcctcctcctacccccaccacacc
atgtcctcccaccccctccactccagccaccacaccatgtcctcccaccccagtgggccc
cctccccagtgcatgcccatggccatgccaccctctgcccagccccctccccgctaccac
caacacatgcgcatgagcgcctcaccatgctag
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