Coregonus clupeaformis (lake whitefish): 121585607
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Entry
121585607 CDS
T08357
Name
(RefSeq) AF4/FMR2 family member 2-like
KO
K15194
AF4/FMR2 family member 2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cclu03021
]
121585607
Transcription machinery [BR:
cclu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
121585607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
THD_CWZF3-5-7
DBINO
Motif
Other DBs
NCBI-GeneID:
121585607
NCBI-ProteinID:
XP_045081388
LinkDB
All DBs
Position
2:complement(6787388..7123240)
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AA seq
1329 aa
AA seq
DB search
MDLFEFDFFRDWELEQQCHYEQDRNALKKREWERRTQEVQQDEDLFSSGFNLFGEPYKTN
KGDALANRVQNTLGNYDEMKELLTSHSNQSHLVGIPKNSVPQTPGPVEKQDQPSFLTEGG
QRGSNRVGTGNHTTSMPPPPSSSSLTSSSLLHSHQSSKKSWSSDWSRGAHCSTQGVGGQG
VQGVQGVGGPACSRGKHSSTHEQQQQPQRHEELLISQGEVVDHRGDSSSPSSSSSSTSTS
TLSRRHGGGQQQAPKAPSAAEHGSYKDSNTHVKSPLEQEPGSHGSSSPIASTSLLPSGLS
TPTFPQGLHVKPSAVQQQKPTAYVRPMDGQDQMPLDSPELKPPLEVGDVGYSNPAFGSTI
TSSKSKLPKLTLTQTGEVGLSSDSSCVEEILREMTHSWPPPLTAIHTPGKAEQTKFPIPS
KESQHIPSGCAGQKRCNVPANKPPTKSVPQKSMLEDDLKISSDEEDTEQQAAEKPKPRST
PLSIPVATSQTSDPGRFSGASASSSESESSSESDSDSESSSSDSECNGASRTATPEPEPP
TNKWQLDKWLNKVTPHNKALISNQPERESHGLSSSQPDHSQQAPGSKGPAPGKSKPGPTV
LLAQTDAKERALLSPIREKAKPKTGPKVSEGKSSKVKSPVAVETAPARRSIGKKQPKKVE
RSSSLEEHSSWSKPINTSISTTPKEKEPPPLLEPPKSRTKGTSGKAAPRKEPHTATTTTS
TPAHPPPAPVLDKKKHRGPSKIIPKSKEFIETESSSSECHSEPEDLIKVPNPPCPGPSSL
QTLKAAKDCNSNILSVSSLTSTCSTSISIPDPGVVGDLLEEPVFFPVPIVQNELLSPLRD
FEDIKSLWVKIELSFLSRIPGQDPPEPPPVKVESREPWEPSAKHRRQSPASLQSTPVEKP
PSKAKRKHKSDHCDAVGRSKKLRLEKDSMLLPPCISPIHHKNMSTKDSLRKQPRKRELLP
PLLSPLSDEPPVRQRRTSECSSFSQEGGASSALLLPTLSCSLPPFSSSSSSSSLHKHRSK
GESKFFSHSKTSSEEDTHSKPSGSFHGNGQSDSDLWSNPSSLSMEHIEPRRPKLTFNNTV
HTADYYMQEAKNLKHKADALMEKFGKAVNYADGALSFIECGNAMERDPLEAKSPYTMYSE
TVELIRYAMRLKNFTSHSATVAEKKLAVLCNRCLSLLYLRMFKLKKDHAVKYSRSLMEYF
KNSAKSSQAPSPWGANGKSTGTPSPLSLSPSPVSSVSSSTGLAGSGASGNVAIPQRIHHM
AASHVNITNNILRSYEHWDTAEKLATESQEFFQELDSMMEPLSQHSSMIELVRHIRQGLH
WLRIEAHLL
NT seq
3990 nt
NT seq
+upstream
nt +downstream
nt
atggacctattcgagtttgacttctttagggactgggaactggagcaacagtgtcattat
gagcaggaccgcaatgcgctcaagaagagggagtgggagcggcggactcaggaggtgcag
caggatgaagatctcttctcctctgggtttaatctgtttggggagccgtacaagacaaac
aaaggtgacgccctggccaaccgggtgcagaacactctggggaactacgacgagatgaag
gagctcctgaccagccactccaaccagagccacttggtgggcatccccaagaactctgtt
ccccagacccctggccccgtggagaagcaagaccagcccagcttcttaaccgagggaggc
cagagagggagcaacagggtgggcacagggaaccataccacctccatgccccctccgcca
tcctcttcctccctgaccagctccagcctgctgcacagccatcagagctccaagaagtcc
tggtcctctgactggtcccggggagcccactgcagcacccagggggtggggggccagggg
gtccagggagtccagggagttgggggcccagcctgcagcagggggaaacactcctccacc
cacgagcagcaacaacagccccaaagacacgaggagctgctcatctcacagggtgaggta
gtggaccacaggggagactccagcagcccctcctcctcctcctcctccacctccacctcc
actctctccaggaggcacgggggcgggcagcagcaggcccctaaggccccatcggcggcc
gagcatggcagctacaaggacagcaacactcatgttaagtctcccctggagcaggagcct
ggttcccacgggtccagttcccccattgcctctacctccctgctgcccagcggcctctcc
acgcccaccttcccccagggtctgcacgtcaagcccagcgccgtgcagcagcagaagcct
acggcctacgtgcggcccatggacggccaggaccagatgcccctggactccccggagctc
aagcctcctctggaggtgggggacgtgggctacagcaacccagcctttggcagcaccatc
accagctccaagagcaagctgcccaagctaaccctgacacagactggggaggtcggcctg
tccagtgactccagctgtgtggaggagattctacgggagatgacacactcctggcctcct
cccctgactgccatccacactccaggcaaggctgagcagactaagttccctattccctcc
aaggagtcacaacacataccctcaggatgtgctggacaaaagcggtgcaatgttcccgct
aacaagcctccaaccaagtctgtgccacagaagtcaatgcttgaggatgacctgaaaatc
agcagtgacgaggaagatactgaacaacaggcagctgagaagcccaagcccagaagtaca
cctctcagcatccctgtggccacgtctcagaccagtgacccgggccgcttcagtggcgcc
tcggccagctccagtgaatcagagagcagctccgagtcggactcagacagtgagagcagc
tccagtgacagcgagtgtaacggggcctcccggaccgccaccccagagcctgaacctcca
acaaacaaatggcagctggataagtggctgaacaaagtgaccccacataacaaagcactt
atcagtaaccagccagagagagagagccatgggctcagcagctcccagcctgaccacagc
cagcaggcccctgggagcaagggcccggccccagggaagagcaagcctgggcccaccgtc
ctgctggcccagaccgacgccaaggaacgggccctcctcagccccatccgagagaaggcc
aaacccaagactggaccaaaggtctcagagggcaagagttcaaaggtcaagtccccagtg
gcggtggagacggccccagccagacgcagcattggaaagaagcagccgaagaaagtggaa
cgctcgtccagcctggaggaacacagctcctggtccaagcccatcaacacctccatcagc
actacccctaaggagaaggagcctccacctcttctggagccacccaagtccaggaccaag
ggcaccagtgggaaagctgcccctaggaaggaacctcacaccgccactaccactacttct
actccagctcatcctcccccagccccagtcctggacaagaagaagcacagggggcccagc
aagatcatccccaagtccaaggagttcatcgagacggagtcttcgtcgtctgagtgccac
tctgaaccagaggatctgatcaaggtccctaaccctccctgcccaggtcccagcagcctg
cagactctcaaagcagccaaggactgcaacagcaatatcctgagtgtcagtagccttacc
agcacctgcagcacttccatctccatcccagaccctggtgtggttggggacctactggaa
gaacccgtcttcttccctgtccccatcgtccagaatgaactgctgtcccctctcagggac
tttgaggacatcaagtccctttgggtgaagatcgagctgagcttcctgtctagaatccca
ggacaggacccccctgagccccctcctgtgaaggttgagtcccgggaaccctgggaaccc
agcgccaagcacagacgccagtcccctgccagtctacagtctacccctgttgagaaaccc
cctagcaaggccaagaggaaacacaagtctgaccattgtgacgctgtcggcaggagcaag
aagttacggttggagaaagactccatgcttcttcccccgtgcatctcacccattcaccac
aagaacatgagcacaaaagactctctgaggaaacagcccaggaagagagagctgctgcct
cccctgctgtcgccgctctccgacgagccccctgtccgccagcgcaggaccagcgagtgt
tcctccttcagccaggagggcggcgctagtagcgccttattactacccaccctcagctgc
tctctgccccccttctcctcctcctcatcctcctcttctttacacaagcaccgcagcaaa
ggagagagcaaattcttctcacattctaagacaagcagtgaggaagatacccacagcaaa
ccatctggcagtttccatggcaatggtcagtctgattccgacctttggtccaacccctca
tctctgtccatggagcatatagagccaagaagaccgaagctaacattcaataacacagtt
cacactgcagactactacatgcaggaagccaagaatctgaagcacaaagcagatgcactg
atggagaagtttggcaaagctgttaactatgctgatggggcgctgtcgttcatagaatgt
ggcaacgccatggaacgggacccgctggaggccaagtctccatacactatgtactctgag
acggttgaactcatcagatatgccatgaggttaaagaactttacaagtcactcagcaacg
gtagccgagaagaaattagctgtattgtgcaatcgctgtttatccctcctgtacttgaga
atgttcaaactgaagaaggaccatgccgtaaaatattcccgttccctgatggagtatttc
aagaattcggctaaaagttcccaagcaccttcaccatggggagccaatggaaagagcaca
ggcaccccgtcgcccctgtcactgagtccctccccggtcagttcggtcagcagcagtaca
ggccttgcgggctccggggcctccggcaacgtggctatcccccagcgtatccaccacatg
gccgccagccacgtcaacatcaccaacaacattctccgtagctatgagcactgggacacg
gcagagaagttggccacagagagccaagagttctttcaggagctggactcaatgatggaa
ccgttgagccaacacagcagcatgatagaactggtgcgccacatacgccaaggactgcac
tggctacggatagaggcccacttgttatag
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