Coregonus clupeaformis (lake whitefish): 121585618
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Entry
121585618 CDS
T08357
Name
(RefSeq) glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like
KO
K00731
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase [EC:
2.4.1.122
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00512
Mucin type O-glycan biosynthesis
cclu00514
Other types of O-glycan biosynthesis
cclu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00512 Mucin type O-glycan biosynthesis
121585618
00514 Other types of O-glycan biosynthesis
121585618
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cclu01003
]
121585618
Enzymes [BR:
cclu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.122 N-acetylgalactosaminide beta-1,3-galactosyltransferase
121585618
Glycosyltransferases [BR:
cclu01003
]
Glycan extension
Type 3 chain
121585618
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Glyco_transf_25
Motif
Other DBs
NCBI-GeneID:
121585618
NCBI-ProteinID:
XP_041757876
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All DBs
Position
17:9929405..9932387
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AA seq
271 aa
AA seq
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MTGPKNLESRTKHIRATWAKRCNKILYMSSVETEFPTVGLNVTEGRAQLYWKTIRAFQYI
YQHHRNDYDWVFKADDDTFVVIENLCYTLSKQDPEKPVYFGRRFRPFVHQGYMSGGAGYV
LSKEAVRRFIEGFDTGKCTHFSIIEDMALGKCMETMGVEPGDSRDVKGRQTFHPYPPDKY
LIKKPPRKRPWFLSYDYYKPREGPECCSDHTISFHYIYNVQMYTLEYLTYHLRPYGYQYR
YNSDAAATEIESNTTTPVSAKHRDNIDRLLH
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgactgggcctaagaacctggagtctagaaccaagcatatccgggccacctgggccaag
cgatgcaacaaaatcctctacatgagttcagtggagacagaattccccacggtggggctc
aacgtaactgagggacgagcccagctctactggaagaccatcagagccttccagtacatc
taccaacatcaccgcaatgactacgactgggtcttcaaagctgatgatgacacgttcgtg
gtcatcgaaaacctctgctacaccttgtccaaacaggacccggagaagcctgtgtacttt
gggcgaaggttccgcccgttcgtccaccagggttacatgagtggtggcgccggctatgtc
ctcagtaaagaagccgtcagaaggttcatcgagggattcgacacggggaaatgtacccac
ttctccatcatagaagacatggctctggggaagtgtatggagacaatgggtgtggagcca
ggggactccagagatgtgaagggaaggcagacgtttcatccctacccaccagacaagtac
ctgatcaaaaagccacccagaaaacggccttggtttctctcctacgactactacaaaccc
agagagggcccagaatgttgttcagatcacaccatatcatttcactacatctacaatgta
cagatgtacacactggaatacctcacctatcatctacggccctatggataccagtacagg
tacaactctgatgctgcagcaactgaaattgaaagtaacacaaccacacctgtctctgct
aaacacagagataacatagacagactactacactga
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