KEGG   Coregonus clupeaformis (lake whitefish): 121585619
Entry
121585619         CDS       T08357                                 
Name
(RefSeq) replication protein A 14 kDa subunit
  KO
K10740  replication factor A3
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu03030  DNA replication
cclu03420  Nucleotide excision repair
cclu03430  Mismatch repair
cclu03440  Homologous recombination
cclu03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    121585619
   03420 Nucleotide excision repair
    121585619
   03430 Mismatch repair
    121585619
   03440 Homologous recombination
    121585619
   03460 Fanconi anemia pathway
    121585619
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cclu03032]
    121585619
   03400 DNA repair and recombination proteins [BR:cclu03400]
    121585619
DNA replication proteins [BR:cclu03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    121585619
DNA repair and recombination proteins [BR:cclu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     121585619
   MMR (mismatch excision repair)
     121585619
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     121585619
SSDB
Motif
Pfam: Rep_fac-A_3
Other DBs
NCBI-GeneID: 121585619
NCBI-ProteinID: XP_041757877
LinkDB
Position
17:complement(9981076..9984073)
AA seq 121 aa
MAVFESPKPRINYSMLSQYISMPICFVGRVEKVHPTGKSFTLSDGEGKSASVELNEPLDE
ELSGVVEVVGVVSNKGAIMASAYNMLREDKGMPFDLELYNEALKVIHDFPQHYQFEIATS
G
NT seq 366 nt   +upstreamnt  +downstreamnt
atggcagttttcgagtcaccaaaacccagaataaactattctatgctgtctcaatatatc
agtatgccgatttgcttcgttggacgtgttgagaaggtccatccaacaggaaaatcattc
actctttcggacggagaagggaagtctgcgtcagtggaactcaacgagccccttgatgag
gagctgagtggggtggtggaggtagttggtgtggtgtccaacaaaggggcaataatggcc
tctgcatacaacatgctcagagaagacaaaggcatgcctttcgacctggagctgtacaat
gaagccctgaaagtcatccacgatttcccccagcactatcaatttgaaatagccaccagt
ggatga

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