Coregonus clupeaformis (lake whitefish): 121585620
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Entry
121585620 CDS
T08357
Name
(RefSeq) LOW QUALITY PROTEIN: la-related protein 7
KO
K15191
La-related protein 7
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cclu03021
]
121585620
Transcription machinery [BR:
cclu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
7SK RNP complex
121585620
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Paralog
GFIT
Motif
Pfam:
RRM_3
RRM_1
RRM_10
OB_RNB
Motif
Other DBs
NCBI-GeneID:
121585620
NCBI-ProteinID:
XP_041757878
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All DBs
Position
17
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AA seq
482 aa
AA seq
DB search
LDXGLTTDCKLIARALKNXSVVEVSIGGTKVRRQRPIGDDPKDVDNRTVYVELLPKKVTH
DWLERVFTKCGNVVYVSVPRYKTTGHSKGFAFVEFETEEEAQKAIEMLNNPPEDAPRKPG
IFPKTKNRKPIPNPPSLNTTLDEEEEKKRKRRKKKSRGSTKEDAPSQAETTAEGAEVVAL
AGGTDKAKKLEKKRRRSQAGGSSESDVQGDMPAKLRRMSEGEEGKVKEEDKVMGSDGKDL
PVKEEKEEEEEKMDDSLLKAKRKRKKKHKERVKIGEEVIPLRVLSKKDWLKLKVEYLTLQ
KRSMGALKTCLTKFHNKGAGGKMEMDTSLQQKQTSEESKKAGEKETPPGPQFESGCIVRI
THTKPLPGRKVIKDALSEVSPVVYVNTLEGDAEGHVRFKTPVEAKAIIDARTELQNKHSW
QLEILSGDHEQRYWQKILVDRQAKLNRPRDKKRGTENLISKDEKIIIARAKEATKHIRFM
ED
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
ttggattgaggtctgacaactgattgcaagttgattgcaagggcactgaaaaattaatct
gtcgttgaggtcagcatagggggaactaaagtacgacggcagcgtccaattggagacgat
ccgaaagatgtagacaaccgaacagtctatgtggaacttctgcccaagaaagtaacacac
gactggctagaacgagtgtttaccaaatgtggaaatgtggtttacgtcagcgtgccgaga
tacaaaaccacgggacactccaaagggttcgccttcgttgagtttgagactgaagaggaa
gcacagaaagccatagagatgctgaacaaccctccagaggacgcccccaggaaacctggc
atcttcccaaagaccaagaacaggaagcctatccccaatccaccctccctgaacaccacg
ctagacgaggaagaggagaagaagaggaagaggaggaagaagaagtccagggggagcacc
aaagaggatgccccgtcacaggcggagacaacagccgagggtgcagaggttgtagcactt
gcagggggcacagataaagccaaaaagctagagaagaagagacggcggtcccaggcaggg
gggagctcagagagtgacgtccagggagacatgccggccaagctgagaaggatgagcgag
ggggaggagggaaaggtgaaggaggaggacaaggtgatggggagtgatgggaaagatctg
cctgtcaaggaggagaaggaggaagaggaggagaagatggacgactccctgctaaaagct
aagaggaagaggaagaagaagcacaaggagagggtgaagattggtgaagaggtcattcct
ctccgggttctctccaagaaagactggctgaagctgaaggtggagtatctgaccctgcag
aagaggagcatgggagctctgaagacgtgcctgaccaagttccacaacaagggggcagga
ggaaaaatggagatggacaccagtctccaacagaaacagacatctgaggagagtaagaag
gcaggtgaaaaggagactccccccgggcctcagtttgagagtggctgcatcgtcaggatc
acccacaccaaacccttacctggcagaaaagtaatcaaggacgctctctctgaggtgtcc
ccagtggtgtatgtgaacaccctagagggggacgccgagggtcacgtccgcttcaagact
ccagttgaggccaaggccatcattgacgctcgcaccgagctgcagaacaaacacagctgg
cagctggagatcctctctggcgaccatgaacaaaggtactggcagaagatcctggtggac
cgccaagctaagctgaaccggcccagagacaagaaacgaggaacagagaacctaatttcc
aaagacgagaaaatcatcatagcccgagccaaggaggccactaagcacatccgcttcatg
gaagactga
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