Coregonus clupeaformis (lake whitefish): 121585628
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Entry
121585628 CDS
T08357
Name
(RefSeq) iroquois-class homeodomain protein irx-4-like
KO
K24889
iroquois-class homeodomain protein IRX
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121585628
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
121585628
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
121585628
NCBI-ProteinID:
XP_041757885
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Position
17:complement(11199339..11203913)
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AA seq
447 aa
AA seq
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MFDIMAYPQLGYPYSPTHQFLMSTSSLANCFEPGGRSLLDSGVTHPSPQPLRCPVYESRL
LGSPGQELPTPAIGLGVYGAGYGKSQGYYGTCGGDATALYARGTLESKDGASAHVGASQT
PAYYPYDYAFGQYPYDRYGYGSSVDSAAARRKNATRETTSTLKAWLQEHQKNPYPTKGEK
IMLAIITKMTLTQVSTWFANARRRLKKENKVTWSPRANKSSDERGCDDDSDGVEGSQEEE
PIKREIDVDDSVMGRCMDLQQSDLEDFDLLESDGSDCDPKHQFHTKDTPVHTPPDQRHHP
KDPSNSPLTHTPDTPQHGNQRLPLSADCLKHTPDHDRTTNSFYTQRDLRSTESSKPKIWS
IAQTATIQPEFPPCMHTATPSESLSPGGYPTEVPHLKVRAAEQQDSPVATLRDWVDGVFH
NPLFRQSSFKPVLSKSAVDRVWIGLNG
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatatcatggcttacccgcagctaggatatccctactcacctacacaccagttc
ctcatgagcacgagctctttggccaactgcttcgagcctggcggaaggtctctcctggac
tcaggtgtgacgcatccctctccccagcctcttcggtgcccagtgtacgagagcaggctg
ctcggctccccaggccaggagctaccaaccccggctataggtctgggtgtgtacggagct
ggctatggaaagagccaggggtactatggcacctgcggaggcgacgcaacagctctatat
gccaggggaaccttggagtccaaagatggagcgtctgcacatgtgggggcctctcaaacc
cctgcgtactatccgtatgattacgcatttgggcagtatccatatgaccgatatgggtat
gggtcatcagtggacagtgccgcggcccgaaggaagaacgctaccagggagaccaccagc
actctgaaggcctggctgcaggagcaccagaagaacccgtacccaaccaagggagaaaag
atcatgctcgccatcatcaccaagatgacactcacacaggtgtccacgtggtttgccaac
gcacggcggcggttgaagaaggagaacaaagtcacatggtcaccacgagccaataaaagc
tctgatgagaggggctgtgatgatgacagtgatggtgtggagggatcgcaagaggaggag
ccaataaaacgcgagatagatgttgatgattctgtaatggggaggtgtatggacctacaa
cagagtgaccttgaggactttgatctgctagagtcagatggttctgactgcgaccctaaa
caccagtttcacaccaaggacaccccagtacacacaccaccggaccaacggcaccacccc
aaagacccttccaacagcccactcacacataccccagacacaccccaacatgggaaccag
cgattgccactgtcagcagattgcctcaaacacacaccagaccatgaccgaacaaccaac
tcattctacactcaacgggacctgcgaagtacagagagcagcaaacctaaaatctggtcc
atcgcacaaactgctacaatccaacctgagttccctccatgcatgcacacagccaccccc
agcgagtccctctccccaggggggtatccgactgaagtaccccacctgaaggtgagggcg
gctgagcagcaggactcgccggtggctaccctcagagattgggtggacggggtcttccac
aacccactgttcagacagagttcctttaaacctgtgttgtccaagtcagccgtggacagg
gtgtggattgggttaaatggatag
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