Coregonus clupeaformis (lake whitefish): 121585679
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Entry
121585679 CDS
T08357
Name
(RefSeq) sodium- and chloride-dependent betaine transporter-like
KO
K05039
solute carrier family 6 (neurotransmitter transporter, taurine) member 6
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cclu02000
]
121585679
Transporters [BR:
cclu02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
121585679
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
121585679
NCBI-ProteinID:
XP_045082598
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Position
17:56078479..56094844
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AA seq
582 aa
AA seq
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MDSLPRERETWANRAEFILSSVGYAVGIGNVWRFPYVCFRDGGGAFLIPYLIMTCLCAIP
LVFMEFTVGQYTKRGPVEALIKICPLMKGVGVAMVMLSFIVVSYNNTVLTWVLYYLFHSF
TEPLPWQLCNATWNVPENCSSFMDNTTTHLQSAAKQFFDHRLLEVTEGMETVGHLRWELV
GILLLIWTILFFSVCKGIKSTGKVVYFTALFPYVVLLALLFNNVRLPGALDGILFFLTPK
WHKLGEIHVWIDATAQIFYSIGVGFGCLMSMASHNKLNNNILRDAMIVTLANSATSIFAG
FVMFSGIGYMAYVHHLQVEQLAVGGPGLAFVVYPEIFSTMPVSQLWAFLFFLMLMCLGLD
SQFALMEVMGTFIMDSFGPKILLMLKYKELVTQLLCFLTFLLGLPCITQGGVYIFQLLDY
SVGITLMFTSLFEVVALSWIFGVRRLSIMVKRILGKPPNVFFKLCWLVVSPLLIVAILVT
TMVQHRPLRYGETYRYPAWADGVAWIIILLSVGWIPLGALHELLGRKGTCLARLKASVTP
RITLEENCNVPVNGDQHQDDVKSLYSLSEVSPLREEKDLGDM
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggacagtctaccaagagaaagagagacatgggccaatcgtgcagagttcatcctttct
tcagtaggctatgcagtcggaattggaaacgtgtggcgctttccatatgtctgcttcaga
gatggtggaggtgcgttcctcattccctacctcatcatgacgtgtctgtgtgccatccca
ctggtgttcatggaatttacagtggggcagtacacaaaaagaggacctgttgaggcgctc
atcaaaatctgccctctaatgaaaggtgtgggtgtggctatggtgatgctgtccttcatc
gtggtctcctacaacaacacagtcctgacctgggttctgtactacctcttccactccttc
acagagccgttgccatggcagctctgtaacgccacctggaacgttccagagaactgctcc
agcttcatggacaacaccaccacccacctgcagtccgccgctaaacagttctttgaccat
aggctcctggaggtcactgaggggatggagactgtgggccacctgcgttgggagctggtc
ggaattctcctgctgatctggaccatcctattcttctctgtctgcaaggggatcaaatcc
actggcaaggtggtgtacttcacagcactgtttccatatgtggtccttctggctcttctg
ttcaacaatgtccgattaccaggagccctggatggcatcctattcttcctaacccccaaa
tggcacaaactgggagagatacacgtatggattgatgctactgctcagatcttctactca
ataggagttgggtttggctgcttaatgtctatggccagccacaacaagctcaacaataac
atcctcagggatgcaatgattgtcactctggcgaattctgccaccagtatttttgctggc
ttcgtcatgttctctggcatcggctacatggcatatgtgcaccacctccaagtggagcaa
ctagctgttggagggcctggtctggcgtttgtggtttacccagagatcttcagcaccatg
cctgtctctcagctctgggccttcctcttcttcctcatgctgatgtgtctcggcctggat
agtcagtttgcccttatggaggtcatggggactttcattatggacagctttggcccaaag
attctcctcatgctgaagtacaaagagctggtgacccaattactctgcttcttgaccttc
ctgcttggccttccttgcattactcagggcggggtttacatcttccagctgctagactat
tctgttggcataacactgatgttcacttctttatttgaagttgttgccctaagctggata
tttggagtacggcggctctctatcatggtgaaaaggattctgggaaagcctccaaacgtc
ttctttaagctctgctggttggtggtctctccgctgttgatcgtggccatattggtcact
accatggtccagcatagaccactccgttacggggagacgtatcgctacccagcgtgggct
gacggtgttgcatggatcatcatccttctgtccgttggctggatccctcttggagccttg
catgagctgcttggaaggaaaggcacttgcttagcgaggctgaaggcgtcggtgactccc
aggatcaccctggaggaaaactgtaatgtgcctgtcaatggagaccaacaccaagacgat
gttaagtctctgtacagtctctctgaggtcagtcctctacgtgaagagaaagacctcggg
gacatgtag
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