Coregonus clupeaformis (lake whitefish): 121585753
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Entry
121585753 CDS
T08357
Name
(RefSeq) adhesion G protein-coupled receptor B1-like
KO
K04596
adhesion G protein-coupled receptor B1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04115
p53 signaling pathway
cclu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
121585753
09143 Cell growth and death
04115 p53 signaling pathway
121585753
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cclu01002
]
121585753
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121585753
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cclu04030
]
121585753
Peptidases and inhibitors [BR:
cclu01002
]
Mixed peptidases
Family P2
121585753
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Phagocytosis
Others
121585753
G protein-coupled receptors [BR:
cclu04030
]
Adhesion receptor family
Brain-specific angiogenesis inhibitor (BAI)
121585753
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_2
AGRB_N
TSP_1
TSP1_spondin
GAIN
TSP1_ADAMTS
TSP1_CFP_C
HRM
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
121585753
NCBI-ProteinID:
XP_041757996
LinkDB
All DBs
Position
17:complement(36155661..36178521)
Genome browser
AA seq
1537 aa
AA seq
DB search
MTWSPPQSGPLVALVALLFLGLTSSVPSGPASDTCATLEQSRFFGLFSSTANLPSMPCSW
TLQNPDPRRYTVYMKITKPTDSCLPRQVKTFQFDSFIETSRTYLGMESFDEVVRLCDAST
SVTYLESSKQFLQLRKVAPRHGLEIVEGESNGEFKAEFLVVGKRNPSMPACQKLCQWLDN
CLSTSTHPNPCGIMNTPCQCWETPVRKPGGCYRGGVYLEKCIPTPRDTGRDIVRDAEIIK
SWSGWGRWSECSMECGGGVQVRSRACQPDDSVCEGVVEEGRACNPQPCIGQVRTRSQALA
SIVGLKRDNADVPTTGVLHPQTVDAAAVADEWSPWSVCSVSCGEGWQARTRFCVTSSYST
QCTGPLRENRPCNNTMVCPVDGAWDEWSPWSLCSSTCGRGYRDRTRTCKQPQNGGEPCKG
PIKQTKFCNIAVCPVDGAWNEWSGWTTCSVSCSNGTKQRTRECNGPSYGGSECRGDWRET
NNCFLKDCPVDGRWLSWSSWGSCSKTCGGGSQQRQRMCEGPYFGGETCPGEKGELRRCNE
KRCPEPHEICQEETDGDVVWKRTPAGDMAAVTCPTDSTGLILRRCTLGAVGLAYWENPTH
IKCISKNYQDISLLAQHGVNKAQKGLMADGISEVISRLRATSDEGTKYSGDLLSIMDVLR
NTTEIYKGVGYSLSNADVENYAQTISNLLKEEHHGKWEEAQLMGANVKEFLQLVENFVDM
IGMQMKDFQDIYEVTENLVLSIHKRPTTMTTDFTFPVKGWRGMMDWVRTSEEKITVSRDA
LSIDQSEGTTAFVTGIILYRNLSSILSFQSNSTVLNSKVVTVMVKPTPGLLSSPVEIEFP
HQHNDTINETCISWDESETSSLLGSWSARSCRAVAVDSFRTKCVCDRLSTFAILARLNPD
MNMDKTLLPSVTLIVGCGVSSLTLLLLIIIYVSVWKYIRSERSVILINFCLSIICSNALI
LVGQTQARNKVVCGVVAALLHFFFLSSFCWVLTEAWQSYMAVTGRLRNRIIRKRFLCLGW
GLPALVVAVSVGFTKAKGYGTVNYCWLSLEGGLLYSFVGPAAAVVLVNMVIGILVFNKLV
SKDGITDVKLKERAGASLWSSCVILPLLALTWMSAVLAMTDRRSALFQILFAVFDSLEGF
IIVMVHCILRREVQEAVKCRVVDRKDDGNGDSGSSLRNNHHTQLMSDFEKDADSNRLGGM
SSSCEEKMPLPPQLPLPMSSNFHTLPSHTTKAHMQAVPEYSSHTLTLKREKSRLHGGMDP
SSCGKPVYVCDGELFQQLDANLARGQVEGSCPDGSGYLLLPNTTSTLRKAKDDPSKYNIS
VEQLPQTRLVHLSGPFAEPQATFGLKTLPSDRVSVSYSERDSPIQNIHNMSSESHITHSS
LGDTFDSMNSMMSKSETISTLSMSSLERQKSRYAELDFEKIMHTRKRHQNMFQDLNRKLH
HAEKQDRESPASDSKSVRWSVSSGGSDKTNHSDKQQPQVERPWDGVQRTQHSPPAWVRKD
LEPLAASPLHMQQVEWEKAGATISMVSQDIIDLQTEV
NT seq
4614 nt
NT seq
+upstream
nt +downstream
nt
atgacgtggtcacctccccagtccgggcccttagtggcccttgtggccctccttttcctc
ggtttgacttccagcgtcccatccggcccggcctctgatacctgcgccaccctggagcag
agccgcttcttcgggctgttctcttcgactgccaacctgccctccatgccgtgctcctgg
accctgcagaacccagaccctcgccgctacaccgtctacatgaagatcaccaagcccacc
gactcctgcctgccccgccaggtcaagaccttccagttcgactccttcatcgagacctct
cgcacctacctgggtatggagagctttgatgaagtcgtccgattgtgcgacgcttcaacg
tctgtaacctacctggagtccagcaagcagttcctgcagctccgcaaggtggcgccaaga
cacggcctggagattgtggagggagagagcaacggtgagttcaaggccgagttcctggtg
gtgggcaagaggaaccccagtatgccagcctgtcagaagctgtgccagtggctggataat
tgtttgtccaccagcacccatcccaacccctgcggcatcatgaacaccccctgccagtgc
tgggagacccccgtcaggaagcccggcggctgctaccgtggaggcgtctacctggagaag
tgcatcccaacccccagagacactggacgtgacattgtacgcgatgccgagatcataaag
agctggagtgggtggggccgctggtctgagtgcagtatggagtgcgggggtggagtccag
gtgcgcagccgagcctgtcagccagacgatagtgtgtgtgaaggcgtggtcgaagagggg
cgggcctgcaaccctcagccctgcattggtcaagtgcgaacccgtagccaagctctggct
tccatcgtcggcctaaaaagagacaacgctgatgttcctaccactggagtccttcaccct
caaacagtggacgctgctgcagttgcagatgagtggtccccctggagtgtgtgttcagtg
agctgtggagagggctggcaggcccgcacccgtttctgtgttacctcctcctacagcacc
caatgcactggccccctccgcgaaaaccgcccttgcaacaacaccatggtctgccctgtt
gatggagcttgggacgagtggtctccatggagcctgtgctcgtccacctgcggccgtggt
taccgtgaccgcacccgcacctgcaagcagccccagaatggaggagaaccttgcaaggga
cccatcaaacagaccaagttctgcaacattgcagtctgcccagtggatggtgcctggaac
gaatggtccggttggaccacctgctcagtctcttgctccaatggcaccaagcagagaaca
cgtgaatgcaacggaccgtcctatggaggctcggagtgccgtggtgattggcgtgagacc
aacaactgtttcctgaaagattgcccagttgacggacgctggttatcatggagctcatgg
ggaagctgcagtaagacctgtgggggaggaagccagcagaggcagaggatgtgtgaagga
ccttacttcggtggagagacatgccctggagagaaaggagagctgagacgctgcaacgag
aaaagatgcccagaaccccatgagatctgtcaggaggagaccgacggcgatgttgtgtgg
aagagaaccccagcaggagatatggctgccgtgacctgccctacagactccacaggcttg
atcttgcgccgatgcacccttggcgctgtaggccttgcttattgggagaacccgacccac
atcaagtgcatctccaagaactaccaggacatttccttgttggcccagcatggtgttaat
aaggctcaaaagggtctgatggctgatgggatttctgaggtgatctcccgactgagggcc
acctctgatgaggggaccaagtacagcggagacctgctgtccatcatggatgtacttagg
aacaccactgagatctacaagggagtcggatacagcctgagcaatgctgatgtggagaac
tatgcccagacaatcagcaacttactgaaggaggaacatcatggcaaatgggaggaggca
cagctgatgggcgctaacgtcaaggagttcttgcagctcgtcgagaactttgtggacatg
atcggtatgcagatgaaggacttccaagacatttatgaagtcacagagaatttagtgttg
agcatccataagcgccccacaaccatgaccaccgacttcaccttcccagtgaaaggatgg
agaggcatgatggactgggtcaggacctcagaggagaagatcactgtctcccgcgacgct
ctgtccatcgaccagtctgagggcaccactgcatttgtgaccgggatcattctctacaga
aacctcagctctatcctgtccttccaaagtaacagcaccgtcctcaactccaaggtagtc
acggttatggtcaagcccaccccaggcctgctgtcctccccagtggaaatcgagttcccc
caccaacataatgacaccataaatgaaacttgcatctcctgggatgagagcgaaacttct
tcgctgcttggatcttggtctgcgcgtagctgcagagcggtcgccgttgattcattcaga
accaaatgcgtgtgtgacaggctctccaccttcgccattttagcgcgtcttaaccctgat
atgaacatggataagactctgcttccctctgtgacgctcatcgtcggctgtggggtctcg
tctctcacccttctgctcctcatcatcatctatgtctccgtctggaagtatatccgctcg
gagcgctcagtgatcctcatcaacttctgcctctccattatctgctccaatgccctcatt
ctggttggacaaacccaggctcgcaacaaggtggtgtgtggagtggtggctgccctcctt
cacttcttcttcctctcatctttttgctgggtgctgacggaagcatggcagtcctacatg
gctgtcacaggccgtctgcgcaaccgcatcatccgcaagcgtttcctctgcttgggctgg
ggactccctgctctggtggtggctgtgtctgttggatttaccaaggctaagggatatggc
accgtcaactactgctggctctctctagagggtggactcctctactcattcgttggaccc
gctgctgctgttgttctggtgaacatggtaattggtatcctggtcttcaacaaactggtg
tccaaggacggcatcaccgatgtcaaactgaaggagcgagcgggagcatcactgtggagc
tcctgtgtgattctgcccctgctggccctcacctggatgtccgctgtcctggccatgacc
gaccgccgctccgctctcttccagattctcttcgctgtctttgactccctggaagggttc
attatcgtcatggtgcactgcatcctgcgtagagaggtccaagaggcagtgaaatgcaga
gttgttgaccgtaaggacgatggcaatggagattctggcagttccctccgtaataaccac
cacacccagctcatgtctgatttcgagaaggatgctgactccaacagacttggtggtatg
agctcctcctgtgaggagaagatgcccctcccacctcagctgcccctccccatgagctcc
aacttccacaccctgccctcccataccaccaaggcccacatgcaggctgtgcccgagtac
tccagccacaccctcaccctgaagagggagaagagccggctgcatggcggcatggaccca
tcctcctgcgggaaacccgtctatgtgtgcgacggcgagctcttccagcagctggatgcc
aacctggcgcgtggccaggtggaggggagctgccccgacggtagtggctacttgctcctg
cccaacacaacctctacccttcgcaaggcgaaagatgacccgtccaagtacaacatcagc
gtggagcagcttccacagaccaggctggttcatctcagcggacccttcgctgaaccccag
gccaccttcggactcaagacgctaccatccgaccgggtcagcgtgtcctactcggagagg
gactctcccatccagaacatccacaacatgtccagcgagtctcatatcacccacagcagc
ctgggagacaccttcgactcaatgaactccatgatgtccaagagcgagaccatctccaca
ctgtccatgagctccctggagagacagaagtcccgttatgctgaattagattttgagaag
atcatgcacacaaggaaacgtcaccagaacatgttccaggacctcaacaggaaattacat
cacgctgagaaacaagacagagagtcccctgcttcagacagcaagtctgtgagatggagt
gtgtcctctggaggaagtgacaaaacaaaccacagcgacaagcagcagccacaggtggag
agaccctgggatggggtccagaggacgcagcattcgccacctgcctgggtgcggaaggac
ctggagcccctggccgcgtcgcccctgcatatgcagcaggtggagtgggagaaggctgga
gccaccatctcaatggtcagccaggacatcattgacctgcagacggaggtctga
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integrated database retrieval system
