Coregonus clupeaformis (lake whitefish): 121585874
Help
Entry
121585874 CDS
T08357
Name
(RefSeq) transforming growth factor beta activator LRRC32-like
KO
K26316
transforming growth factor beta activator LRRC32
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
121585874
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_6
LRR_9
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
121585874
NCBI-ProteinID:
XP_041758108
LinkDB
All DBs
Position
2:complement(20486714..20494687)
Genome browser
AA seq
676 aa
AA seq
DB search
MIRPTATTIRSLLLLCCSLSHSLIQLNTGTGRLHDDQQEPTSLRFKNLSSVPEGLDVRLR
DLDLSNNFIRHINSQGLGLPSLLRLTLSYNQLEIISEGAFRDVAQLQELNLARNALSHNV
DSNSRALGSLHRLRSLDISMNGLDDKAVELYLHNKSVLEHLDLTGNGLTRLTAKLFAESL
SMRSIRIENNLITAIEEGTFETLKKLKTLNLARNNLVYICDFKLHQVKLLNLSRNSIEFF
VTREDGHPYELEILDLSYNNLLYFPMVPKTNQLRYLHLQSNMVGALETDTLLSEADSLYR
ELTSDDKVKDAVENNNVYSNWRLMPLVYMDLSSNHFRSLPLETLSHLTSLVTLNLSKNCL
QDISYNTAKGCSGHVGCYRQPPLTLPSLRYFDLQNNGLRQLSTLFLEALPNIETLNLKEN
SVRPCDPKDQLGPSETMRENSPTNMSSCVSFRNIKTLRHLDLQDNGIKTLHQNTFERTPL
VSLNLASNVDVILNSGALEGLQSSLQSLSISGNNMTTSALSLPCLKALRRLNMSDNNVDV
LPSTISCSPLTELDVRNNGLTSMNESLVDRLSLYLHVLYVSGNSFNCCDTKWLEAINKEK
VKIPDLDHAVCLHVNGTLLTGFLRNHSLHCSLELSPKITELNLGQITIIMLFVSTVLITL
VVFVKKVCCNTGSFIV
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgatcagacctacggcgacaaccatcagatcccttctactgctgtgctgctcgctgtct
cacagcctcatccagctcaacaccgggactggaaggctacatgatgaccaacaggagcca
acttctttgcggttcaagaacctgtcatctgttcctgaggggctggacgtgaggctgagg
gatctggatctatccaacaactttatcagacatataaacagccagggtctgggtcttcca
tccctactgaggctgaccctcagctacaaccagctggagatcatatctgaaggggctttc
agagatgtggcccagcttcaagagctgaacttggccaggaacgcattgagccacaatgtg
gacagtaacagccgagctctcgggtctctccacagactgaggagtttggatatctccatg
aacggtctggatgataaagcggtggaactctaccttcataacaaatcagttctagaacat
ctggatctcacgggcaacggtttgacgcgactcacggccaagctgtttgcagagagcctg
agcatgagaagcattcgcattgagaacaatctgatcacggcgatagaggagggaacgttc
gaaacgttgaagaaactcaagaccttaaacttagccagaaataatctagtctacatctgt
gattttaaactccatcaggtgaaactcttgaatcttagcaggaattccatagagttcttt
gtgacccgtgaggacggtcacccatacgagctggagatcttagacctgagctacaacaac
ctcctctatttccctatggtccccaagaccaaccagttgagatacctccacttacagagc
aacatggtgggggccttagagacagacaccctgctatcagaggcagactctctgtacaga
gaactaacgagtgatgataaggttaaggatgctgtagaaaacaacaacgtatactccaac
tggagactgatgccgttagtgtacatggacctcagtagtaaccacttcaggtctttacct
ttggagactctgagccatctgacgtctttggtgacgctgaacctcagcaagaactgtctc
caggacatcagctataacaccgcgaagggctgcagcggtcatgttggttgctaccgccaa
cctcccttgactcttccttccctacgctacttcgacctgcagaacaacggtcttcgacaa
ctctccaccttgttcctggaagccctgccgaacatagagacattaaacctgaaggagaac
tctgtgaggccttgtgatccaaaggaccaactgggaccatctgagacaatgagagagaat
agtccaactaatatgtcctcctgtgtttccttccggaacatcaagactctgagacatcta
gatctccaagacaacgggatcaaaacactccatcagaacacatttgaaagaacccctttg
gtttctctcaacctggccagtaatgtagatgtgatcttgaatagtggcgcactagaaggg
ttgcaaagtagtctccagtctctgagtatcagcggtaataacatgacaacctctgccttg
tctctgccttgtctgaaagcattgagacgactcaacatgtccgacaacaacgtagacgtc
ctgccgagcaccatcagctgttctcctttgacagaacttgacgtgagaaataacggtcta
acgtccatgaatgaatctttggttgatcgcttgtctctttatcttcatgtgttgtatgtc
agtggcaactcattcaactgctgtgacaccaaatggctcgaagccataaacaaagagaag
gtgaagattccggacctagaccacgctgtgtgcctccatgtcaacggtactctgttgact
ggctttctgcgtaaccattcactgcactgttcattggaacttagcccaaaaataacagaa
ctgaacctcgggcaaataacaataataatgttgtttgtgtcaacagtattgataacatta
gttgtatttgtgaagaaggtttgttgcaacacagggtcattcattgtgtaa
DBGET
integrated database retrieval system
