Coregonus clupeaformis (lake whitefish): 121585879
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Entry
121585879 CDS
T08357
Name
(RefSeq) growth/differentiation factor 6-A
KO
K20012
growth differentiation factor 6
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04060
Cytokine-cytokine receptor interaction
cclu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
121585879
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
121585879
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cclu04052
]
121585879
Cytokines and neuropeptides [BR:
cclu04052
]
Cytokines
Transforming growth factors (RSTK binding)
121585879
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GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Herpes_IE2_3
Dsh_C
Motif
Other DBs
NCBI-GeneID:
121585879
NCBI-ProteinID:
XP_041758116
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Position
17:3031868..3038968
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AA seq
414 aa
AA seq
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MDAFQVLSLYLLLIFIWNIPCFQSAAIISPSVPRRNKGAKILHDGQRSTKFLKEIFASSP
ILSHHQEDFNKEAIVPHDYMLSIYRTYSAAERLGLNASFFRSSKSANTITSFVDRGTDDL
LHSPLRRQKYLFDVSTLSDKEELVGAELRIFRKVPGDLQTSPTGLYDIQLLSCRSERLLD
SRSLDPLDSRKPGWEVLDVWEMFKNRHHSDQGSQLCLQLKGTLSKSEMEIDLKQMGFDRT
GRTQQEKAILVVYTRSKKRENLFNEMKEKIKSRGSGSRSEEERGLQFKARRRRRTALNNR
HGKRHGKKSKSRCSKKALHVNFKELGWDDWIIAPLDYEAYHCEGVCDFPLRSHLEPTNHA
IIQTLMNSMDPNSTPPSCCVPTKLSPISILYIDSGNNVVYKQYEDMVVEQCGCR
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggacgcatttcaagtattatcgttatatttgttactcatcttcatttggaatatacca
tgttttcagtcagctgccatcatatcgccctctgtgccaaggagaaacaagggagccaag
atccttcatgatggacaaaggtcaaccaaatttctcaaagagatcttcgcatcttctcct
atcttaagccatcaccaagaagactttaataaggaagcaattgtgccccacgattacatg
ctttccatatacaggacgtattcggctgcagagagactcggactaaacgcaagttttttc
cgctcctcaaagtctgcaaacaccataacaagttttgtggacagaggaacagacgatctc
ttgcactctcctttgcgaagacaaaagtatctgtttgatgtctcaaccctttcagacaaa
gaggagttggttggagctgaattaaggatatttagaaaagtgcccggggatttgcaaacg
tccccgacaggtctctatgacattcaattactctcctgtcgatcagaacggctactggat
tccagatcccttgatcctctggattcccgaaaaccaggatgggaggttttggacgtgtgg
gaaatgtttaaaaaccggcatcactctgatcaggggagccagctttgtctccagctcaag
ggcactcttagtaaatcagaaatggaaatcgatttaaaacagatgggatttgacagaacc
ggccgaacccagcaagagaaggccatcttggtggtttacaccaggtccaagaaaagggag
aacctgttcaacgaaatgaaagagaagatcaagtcgcgtggatcagggagcaggtcggag
gaggagaggggcctgcagttcaaagccaggcgccgtcggaggactgcattgaacaatcgg
catgggaaaagacatggcaaaaagtcaaaatctagatgcagcaaaaaggctctgcacgtt
aattttaaagagctagggtgggatgactggatcattgcgccattggattatgaggcgtac
cactgcgagggtgtgtgcgacttccctttgagatcgcatttagagccgacaaaccatgcc
atcattcaaactctcatgaattcaatggaccccaatagcacacctcctagctgttgtgtt
cccaccaaactaagtcccatcagcattctttacatagactcgggcaataacgttgtgtac
aaacagtacgaggacatggtggtagagcagtgtggctgcaggtag
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