Coregonus clupeaformis (lake whitefish): 121585891
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Entry
121585891 CDS
T08357
Name
(RefSeq) transcriptional regulator ATRX-like
KO
K10779
transcriptional regulator ATRX
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
121585891
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121585891
03036 Chromosome and associated proteins [BR:
cclu03036
]
121585891
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
121585891
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
121585891
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Motif
Other DBs
NCBI-GeneID:
121585891
NCBI-ProteinID:
XP_045081542
LinkDB
All DBs
Position
2:20604234..20684149
Genome browser
AA seq
1698 aa
AA seq
DB search
MMMEEVEPGISDTERPSPSHTKRKPAVAAKHTGGNESATSDGSGQEDGASDNPSEGMLVV
RPPAGSDNKESRGAMKLRVDLSRKKTDTTLEERIDCTACGQQVNHFQRHSVFEHPMLHVL
LCKSCYKYYTSDDINKDEDGMDEQCRWCAEGGNLICCDYCHNAFCKKCILRNLGRKELSM
ITDENSKWSCYICSPQPLADIASNCSNIMTKLESFWRTGRKKEREEKERKEVKGAQEHSD
GSGTLTFSYKTLKVPKELVKRTKKLIETTTGLNNTFIQFIQQAEEEQGAGGGGSGTRHRH
LKAFRSVLADLKKAHAALEEDLESQFTSQDQGMQNGDAVSNTDGHDGHDQMDNMVEDGQE
AEEVKMADTEDGEEPEEEGEDGGVSEDAEMEGSPTPKPQDHSETDSQAKDQTVVKVEEEE
EEEEEKEKEEGDRDKDIVSVGPSVPDELFQMVESLADSTGLTPGNDATEPTAASQSESPA
TGSTRKSHDTQKEKAMPKVKNLIVKLTPVPVVTTRTSRSKSKDKDGGKEKERSKDGGKEK
EGSKEKERSKDGGKERSKEVEGGGGSEEDSRRSSRTKTTPLRKSPDGKNKMSASSQENSD
SEGEEKSPSKLKSRTKGSSEKEKERGEEEEEEEDDEGRQESKASEETADPSKQEVDSDSD
EVPDILLQTAAADHSSDEDVQQDADGNQGGRSFKKFKLNKQDQEEKDKKPAAKRKLKADH
SDNSESDSDEDVKKKKKKKSSTASVKKTSKKKGSDGSSNSDSDLEKEMKGLSKLGMGKRR
SSRVKKGSEEKSKGGDRKRSYELKRKARGRGAKQQDSSSDVEEEEEEGGGSGEESADQQK
IKPIVEETLVAGRGTFHQSSGDEGNHDASQMADDDDDEDPENRIAKKMLLAQIKANYSSG
AEESSDEDGEEKEQEKEKEGEEDGEEDGEEDGEEDGEEQEEDDDDDDDDDGDSGSDVDMK
KGGGRRHRLLRHKLTLSEGESGEEKEKPASKKKKKETKRTRQKVGSDDSADSDFEESVNS
SESGVSEEISEKESSEESEEEESEKEGSSRRRTTRSSKKKKKKKEERSYAQKKKRRRIKV
QDSSSDEKSGSGEDGSGKEDGDSPKGQRKKIRKILKDDKLRTETRDALKEEEERRRRIAE
REQLREKLREVLVVEEASAVACPITTKLVLDEDEETKEPMVQVHRNLVTKLKPHQVDGVQ
FMWDCCCESVKKTKKNTGSGCILAHCMGLGKTLQVVALLHTLLLCDNLDFSTALIVCPLN
TVLNWLNEFEKWQYGFKDEESLEVTELATVKRPQERACALQQWQEDGGIMIIGYEMYRNL
TQGRNIKSKKLKETFQKTLVDPGPDFVICDEGHILKNEASAVSKAMNSIRTRRRVVLTGT
PLQNNLIEYHCMVNFIKENLLGSVKEFRNRFVNPIQNGQAADSTDQDVRIMKKRAHILYE
MLNGCVQRRDYSALTKFLPPKHEYVVSVRVTPIQCTLYRHYLEHLTGAGNVVEGGRGRAG
TKLFQDFQMLSRIWTHPWCLQLDYISKENKGYFDEDSMEEFIASETEESSMSMTSEDERQ
KKKKKRGKAKKKDSDSDSDALEVIKEWNTSSRGGDPSSRNRAEPEEEVRPASSPGTRSPD
WHKEFVTEADSEILEHSGKMVLLFEILRMAEEVEDKMCPWPANQQDSQATEGEGLGAEAA
GGGCPFSAQAPMAGAGAG
NT seq
5097 nt
NT seq
+upstream
nt +downstream
nt
atgatgatggaggaggtggagcctgggatctcagacaccgagagaccctccccttctcac
accaagaggaagcctgctgtcgcagccaagcacaccggagggaatgagtctgccacctcg
gatgggagtggacaggaagatggcgcctctgacaacccctcagagggcatgttggtggta
cggcctcccgctgggagtgataacaaggagagcagaggagccatgaagctcagagtggac
ctctcaaggaaaaagacagataccactctggaggagcgaatagactgcaccgcctgtgga
cagcaggtcaaccacttccagcgccactcggtgtttgagcaccccatgctccatgtgctc
ctctgcaagtcgtgctataagtattacaccagcgatgacatcaataaagacgaggacggc
atggacgaacagtgcaggtggtgtgctgaagggggcaacctgatctgctgtgactactgc
cacaacgccttctgtaagaagtgcatcctgcgtaacctggggcgcaaggagctgtccatg
atcaccgacgagaacagtaaatggtcctgctatatctgcagcccccagcccctcgccgac
atcgcctccaactgctccaacatcatgaccaagctggagagcttctggcgcacgggacgc
aagaaagagagggaggagaaggagaggaaggaggtgaaaggggcacaggagcattcagac
gggtcagggaccctcaccttctcctataagactctgaaggtccccaaggagctggtgaag
aggaccaagaagctgattgagacaaccacagggctcaacaacaccttcatccagttcatc
cagcaggctgaggaggagcagggagcaggaggaggcggcagcgggaccagacacagacac
ctcaaggccttcaggtctgttctggctgatctgaagaaggcccatgctgccctggaggag
gacctggagtcacagttcacttcccaggaccaggggatgcagaacggggatgcggtctcc
aacaccgacggccatgatggccacgatcagatggacaacatggttgaggatgggcaggag
gcagaagaggtcaaaatggctgacactgaggatggggaggagccagaggaggagggggag
gatgggggcgtgtcagaggatgcagagatggaggggagccccacccccaagcctcaggac
cactcagagacagacagccaggccaaagaccagacagtggtgaaagtggaggaagaggag
gaggaggaggaggagaaggagaaggaggagggtgaccgggataaagacattgtgtccgtc
gggccgtccgtccctgacgagctcttccagatggtcgagagtctggcggactccacaggg
ttaacacccggcaatgacgccacagagcccacagcggctagccaatccgagagccccgcc
accggctcaaccaggaagtcacatgacacccagaaggagaaggccatgcccaaggtgaag
aacctgatcgtgaagctgacacctgttcccgtggtgaccacacgcacctccaggtctaag
agcaaggataaggatggagggaaggagaaagagaggagtaaggatggagggaaggagaaa
gaggggagtaaggagaaagagaggagtaaggatggagggaaggagaggagtaaggaggtg
gagggaggtgggggctctgaggaggatagccgtcgctccagccgcacaaagaccacaccc
ctcaggaagtcaccggacgggaagaacaagatgtccgcctcctctcaggagaacagtgac
tcagagggcgaggagaagagccccagcaagctgaagagtagaaccaaaggcagctctgag
aaggagaaggaacggggcgaggaggaggaggaggaggaggatgatgaggggcggcaagag
agcaaggcctccgaggagaccgctgacccttctaaacaggaagtggactctgactctgac
gaggttccggacatcctgctccagactgcagcggcggatcacagctcggacgaagatgtg
caacaggatgccgatggtaaccagggcggcaggagcttcaagaagttcaaactcaacaag
caagaccaagaggagaaagacaagaagccggcggccaaacgcaaactgaaagccgaccac
tccgacaactcagagtccgactcagacgaagacgttaagaagaagaagaaaaagaagtcc
tccacggcttctgtcaaaaagacctccaagaagaagggctcggacggctcctctaactcc
gactctgacctggagaaggagatgaagggactcagcaaactgggaatggggaagcggagg
agcagccgtgtgaaaaagggtagcgaggagaagagcaagggcggggatcggaagcggtcg
tacgagttgaaacgcaaagccagaggtagaggagccaagcagcaagattcgtcgtctgat
gtggaggaggaagaggaggagggaggagggtctggagaggagagtgcagaccagcagaag
attaaacccatcgtggaggagacattggtagcagggaggggaacctttcaccagtcctca
ggagatgaaggtaaccatgatgcttctcagatggctgatgacgatgatgatgaggatcca
gagaacagaattgccaagaagatgctgctggcccagatcaaggccaactattcctctgga
gcagaggagagctctgacgaggacggagaagagaaggaacaggagaaggagaaggaagga
gaggaggatggagaggaggatggagaggaggatggagaggaggatggagaggagcaagag
gaggatgatgatgatgatgatgatgatgatggggactctggctctgacgtggacatgaag
aagggtggggggcgtcgccaccggctgctccgccacaaactgacgctgagtgagggagag
tcaggagaggagaaagagaaaccagccagcaagaagaagaagaaggagaccaagaggacc
agacagaaagtgggtagtgatgactcagcagactcagacttcgaggagtcagttaacagc
agtgagtcaggagtgagtgaagagatcagtgagaaggagtcgtcggaggagtctgaggaa
gaggagtctgagaaggaaggcagcagccgcaggaggaccacacgctcctccaagaagaag
aagaagaagaaggaggagaggagctacgcccagaagaagaaacgccgccgcatcaaggtc
caggactcttcgtccgacgagaagagcgggtcaggagaggacggctcggggaaggaggac
ggagactctcctaaaggacagaggaagaagatcagaaagatcctcaaggacgacaagctg
aggactgaaaccagggacgcccttaaggaggaggaggagaggaggaggcgcatcgcggag
agggagcagctcagggagaaactcagagaggtactcgtggtggaggaggcgtccgccgtg
gcttgtccaatcacaaccaagctggtgctggatgaagacgaggagaccaaggagcccatg
gtgcaggtccaccgcaacctggtcaccaagctcaaaccacaccaggtcgacggggtccag
ttcatgtgggactgctgttgtgagtcggtgaagaaaaccaagaagaacactggttctgga
tgtatcctggctcactgtatgggcctgggcaaaacactgcaggtggtggctctactccac
actctactgctgtgtgataacctggacttctccacggctctgatcgtctgtcctctcaac
actgttctcaactggctcaatgagtttgagaagtggcagtacggcttcaaggacgaggag
agtttagaggtgacggagctggccacagtaaagcgtccccaggagagggcgtgtgctctg
cagcagtggcaggaggatgggggcatcatgatcattggctatgagatgtaccggaacctc
acacagggaagaaacatcaagagcaagaaactcaaagagaccttccagaagaccctggtc
gacccaggcccagactttgtgatctgtgatgagggccacatcttgaagaacgaggcgtcg
gccgtctccaaagccatgaactccatcaggacccgacggagagtggtgctcaccggcacc
ccgctgcagaacaacctcatagagtaccactgcatggtgaacttcatcaaggagaacctg
ctggggtccgtgaaggagtttaggaaccgtttcgtcaaccccatccagaacggacaggca
gcggactctacagaccaggatgtacgcatcatgaagaagagggctcacatcctctacgag
atgctcaatggatgtgtacagagaagagactactctgccctgaccaagttcctgcctcct
aaacatgagtacgttgtgtctgtcagagtcacgcccatccagtgtactctgtaccgacac
tacctggagcacttaacaggtgcggggaacgtggtggaggggggtcggggccgagccggg
accaaactcttccaggacttccagatgctcagcagaatctggacccatccctggtgtctc
cagctggactacatcagcaaggaaaacaaggggtactttgacgaggacagcatggaagag
ttcatcgcctcggagactgaggagtcttctatgagcatgacctctgaggacgagagacag
aaaaagaagaagaagcgggggaaagctaagaagaaggacagcgactcggacagtgatgct
ctggaggtgataaaggaatggaacaccagctccagaggaggagacccatccagccgcaac
cgggccgagccagaggaggaagtgcgtccagcctccagccctggcaccaggagtcctgac
tggcacaaggagtttgtaacggaggctgactctgagatcctggagcattctgggaagatg
gtgctgctgtttgagatcctccgcatggctgaggaggtggaggacaaaatgtgtccctgg
ccggcaaatcagcaggactcccaggcaacagagggggagggcctgggcgctgaggcggca
ggtggagggtgtcccttctctgcgcaggcgccgatggctggggctggggctggctga
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integrated database retrieval system
