Coregonus clupeaformis (lake whitefish): 121585917
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Entry
121585917 CDS
T08357
Symbol
tcea3
Name
(RefSeq) transcription elongation factor A protein 3 isoform X1
KO
K03145
transcription elongation factor S-II
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cclu03021
]
121585917 (tcea3)
Transcription machinery [BR:
cclu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
121585917 (tcea3)
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Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
HVO_0758
Motif
Other DBs
NCBI-GeneID:
121585917
NCBI-ProteinID:
XP_041758170
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Position
17:17322554..17361129
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AA seq
798 aa
AA seq
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MTREEELIRIAKKLDKMVSRNNTEGALDLLNELKSFNMTLKLLQETRIGMSVNGIRKHCT
DDEVVSLAKILIKDWKRLLDAARTQSTERPNEMKNGVDSNKSTGSPVRSPSEKDTSHKRP
DVSDSDPESEKEEYSDKRRKEKANVEHKKDERAVDLKRERYTDAFKNKQHAEQSKNGKHT
KDGRKERHVEHSKKEQHLEEPKRERHFEESRKERHVPVHDTKNERHVQEPKKERHLEEPK
KESHFEEPKNKSHSDKPRRESFADELRNERHTEERRKEIPMYEPPQERPVENHRKGFERR
SVLDDLYPCCYSPPRPPRPPRLPPPVRRMSGEMNKGVKKERERRDSSDTLSPSRPHPRPT
PPSRHTSVKVKKERKKAPPDPNAPLPPLHPHPSMPTAAEVKKERKEPLQISVAQVVRKEP
PDPNAPFAPLPLHLHPPPSVKRPSVEVKKERKESSDYKPVSLKVTSSDHVKKDRKDSDSK
VPKRPSVDAKKERKDLSDSKPKPAKRQSLDSSDSKQKPPKRPNLDGKKDRKDSTDSKPSH
SVKRHSTDSKSDRRDSMDSKTGSSPSAKKFSSEMKESHGSKSSHPGPLQRKSSTDSIERR
GKPEMPKIPTTPTSPMSPSFSTAAVPLSPYLATGETIRDKCIEMLAAALRTDDNFKEFGT
NCDSMAAEIEDHIYKEMGATDMKYKNRVRSRISNLKDPKNPGLRRNVLAGGIELRRFAIM
SAEEMASDELKQLRNNLTKEAIREHQLSKTSGTISDLFQCGKCGKKNCTYNQMQTRSADE
PMTTFVLCNECGNRWKFC
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgagaagaggagttaattcggattgcaaaaaagctggacaagatggtgtctaga
aataacacggagggtgccctggacctgctgaatgaactgaagagcttcaacatgacgctg
aaacttctgcaggaaacgaggatcggcatgtctgtgaatggaatcaggaagcactgcaca
gacgacgaggtcgtttccctggccaagatcctcatcaaggactggaagagactgctggat
gctgcacgtactcagagtactgagaggcccaatgagatgaagaatggggttgactccaac
aaatccacagggtccccagtcaggtccccctcagagaaagacaccagtcacaagaggccg
gatgtttctgattcagatcctgaatctgaaaaggaagaatactctgacaaacggcgaaaa
gagaaggccaatgttgaacacaaaaaagacgagagagctgttgaccttaaaagggagaga
tatacagatgcattcaaaaacaaacagcatgcagaacaatccaaaaatggaaaacataca
aaagatggcagaaaagaaagacatgtagaacactccaaaaaagaacaacacttagaagaa
cccaaaagggagagacacttcgaagaatccagaaaagaaagacatgtacctgtacatgac
acaaaaaatgaaagacatgtgcaagaacccaagaaagaaagacatttagaagaacccaag
aaagaaagtcatttcgaagaacccaaaaataaaagccattcagacaaacccagaagggag
agttttgcagatgaactgagaaacgaaagacacacagaggaacgcagaaaggagatacca
atgtacgaacccccacaagagagacctgttgaaaaccacagaaaagggtttgagaggaga
agcgtcttggacgatctttacccctgttgttactctcctcctcgacccccccgaccaccc
cgccttcctccccctgtcagacgtatgtctggggagatgaataaaggggtgaagaaggag
agagaaaggagagattcttcagacactctgtctccttctcgtcctcaccctcgtcccacc
cctccgtccagacacacctcagtgaaggtgaagaaagagaggaaaaaagctcctcctgac
cctaatgccccgcttcctcctcttcatcctcatccttctatgcccactgcagcagaggtc
aagaaggagagaaaagagcctctgcagatttctgtggctcaggtggttagaaaagagcct
ccggaccccaatgctccttttgctcctcttcctctccatctccatcctcccccttctgtg
aagcgcccgtcagtggaagtcaaaaaggagagaaaagagtcgtcagattacaaacccgtt
tctctgaaggtgacatcatctgaccatgtgaaaaaggacagaaaagactcagatagcaaa
gtgcccaaaagaccatctgttgatgccaagaaagaaagaaaggatttgtcagattccaaa
ccaaaacctgctaaaaggcagagtctggactcgtcagattccaaacaaaaacctcctaaa
aggccaaatctggatggcaagaaagacagaaaggactccactgactccaagcccagccat
tctgtgaaacgtcattcgactgactccaaatcagacaggagggactctatggattccaag
actggcagctcaccctcagctaagaagttctctagcgagatgaaagaatctcatggctcc
aagtcctctcaccctggccctctgcagagaaagtcctcaacggacagtattgaacggaga
gggaaaccagagatgccaaagatcccaaccacccccaccagtcccatgtccccctccttc
agcacagcggcggttcccctgtccccttacctggccactggagaaaccatcagggacaag
tgcatcgagatgctggctgctgctctacgcacagatgacaacttcaaggaatttgggaca
aactgtgattccatggcagcagagattgaagatcatatttacaaggagatgggagccaca
gatatgaagtataaaaacagggtgcggagccgcatcagcaacctgaaggaccccaaaaac
cctgggctgcggaggaacgtcctggctggaggcatcgagctgagacgcttcgccatcatg
tctgctgaggagatggctagtgatgagctgaagcagctgaggaacaatctgactaaggag
gccattagggaacaccagctgtccaaaaccagcggtaccatttctgacctgtttcagtgc
ggcaagtgcggcaaaaagaactgcacctacaaccagatgcagacccgcagcgctgacgag
cctatgaccacttttgttctgtgtaacgagtgtgggaaccgctggaagttctgctga
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