Coregonus clupeaformis (lake whitefish): 121585944
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Entry
121585944 CDS
T08357
Name
(RefSeq) WASH complex subunit 5 isoform X1
KO
K18464
WASH complex subunit strumpellin
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121585944
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121585944
Membrane trafficking [BR:
cclu04131
]
Protein recycling
Others
WASH complex
121585944
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Strumpellin
Motif
Other DBs
NCBI-GeneID:
121585944
NCBI-ProteinID:
XP_041758231
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All DBs
Position
17:13985026..14014333
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AA seq
1159 aa
AA seq
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MVDFLAENNLCGQAVLRIVSRGNAIIAELLRLSEFIPAVFRLKDKSDQQKYGDIICDFSY
FKGPEYYDSKVEAKPELQDLDEEFRENNIEILSRFYLAFESVHKYTVDLIRYLDDLYEGV
YIQQTLETVLLNEDGKQLLCEALYLYGVMLLVIDQKMDGEVRERMLVSYYRYSAARSSAD
SNLDDICKLLRSTGYSSQSGAKRPANYPESYFQRVPISATFISMVIGRLRSDDIYNQVSA
YPLPEHRSTALANQAAMLYVCLYFTPSILHTQQAKMREIVDKYFPDNWVISVYMGITVNL
VEAWEPYKAAKIALNYTLDSANIREQASRYSVSMDGLRPQIQQLLKEGFLREEIVLDNIP
KLLNCLRDCNVAIRWLMLHTADSAYDPNNKRLRQIKDQVINDSKYNPKILFQLLLDTAQF
EFTLKEMFKQMLSEKQLKWESYRTEGAERMTELAEVFSGVKPLTRVEKNENLQAWFREIS
KQIESLNYEDSTAAGRKTVQLIQALVEVQEFHQLESNLQVCQFLADTRKFLHQMIRTINI
KEEVLITMQIVGDLSYAWQIIDSFTSIMQESIRANPSMVTKLRATFLKLASALDLPLLRI
NQANSPDLLSVSQFYSGELVTYVRKVLQIIPESMFTSLAKIIKLQIHAIMEVPTRLDKDK
LKDYAQLGARYEVAKLTHAISIFTEGILMMKTTLVGIIKVDPKQLLEDGIRKELVRRVAY
ALHKGLIFNPKAKTSELMPKLKEMAATMDGFYRSFEYIQDYVSIYGLKIWQEEVSRIINY
NVEQECNSFLRTKIQDWESVYQSTHIPIPKFPSVDESATFIGRLCREILRITDPKVTCYV
DQLNTWYDLKTHQEVTNNRLFSEIQDTLGTFGLNGLDRLLCFMIVKELQNFLTVLQKTIL
RDKAMVDVFKAMLSAVNPVKGIVGNASKVYTNAVAKTQKIWGPYLESIMKVGQMQILRQQ
IANELNYSCKFDSKHLAAALENLNKSLLADIEAHYQDPSLPYPKEDNNLLYEITASLEAA
GIHNPLNKIYITTKRLPYFPIVNFLFIFAHLPKLQYSKNQGMTCRKATDPVDWPPLVLGL
LTLLKQFHSRYTEHFLALIGQFIRSIMDQCTSQRIPDMPSDVVGALMFLEDYVRYTKLPR
KVAEAHVPSFIFDEFRTVL
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atggtggatttcctggcggagaacaacctgtgtggccaggcagtgctgaggatcgtgtcc
cgggggaacgctatcatagcggagctcctccgcctctcagagttcatccctgccgtcttc
aggctcaaagacaagagtgaccagcagaaatatggagatatcatctgcgacttcagctac
ttcaagggtccagagtactatgacagtaaggtagaagccaaaccagagcttcaggatctg
gatgaagagttccgggagaacaacatagagatactctcacgattctacctggcttttgaa
agtgtccacaagtacaccgttgatctaatcaggtacctggacgacctgtatgaaggtgtc
tacatccagcagaccctggagactgtcctgctgaatgaggatgggaaacagctgctgtgc
gaagccctgtatctctatggggtcatgctgttggttatcgaccagaagatggacggggag
gtcagagagaggatgctggtgtcctactatagatacagtgccgctcgctcctcagcggac
tctaacctggatgacatctgtaagctgctgcgtagtacagggtactctagccagtcaggg
gccaaacggccagctaactaccctgagagctacttccagagagtgcctatcagcgccacc
ttcatcagcatggtgatcggcaggctgcgctctgatgacatctataaccaggtgtctgcg
taccccctgcctgagcaccgcagcacggcgttggctaaccaggctgccatgctgtatgtc
tgtctctacttcactccctccatactgcacactcaacaggccaagatgagggagatagtg
gacaagtacttccctgataactgggtcatcagtgtatatatggggatcactgtgaatctg
gtggaggcctgggaaccatataaagctgccaagatcgccctcaactacaccctggactca
gccaacatcagagagcaggccagtcgttattcagtcagtatggatggcctgaggccccag
atccagcagctgctgaaggaagggttcctgagggaggagatagtcctggataacatcccc
aagctgctcaactgtttaagggactgtaatgtggcgatacgctggctgatgctacacact
gcagactcagcctatgatcccaacaacaagcgtctgcgacagatcaaagatcaggtgatc
aacgactccaagtacaaccccaagatcctcttccagttactcctagacaccgcccagttt
gagttcactctcaaagaaatgttcaagcagatgctgtcagagaagcagctgaaatgggag
agctatagaacagagggagctgagaggatgacggagctggctgaggtgttctctggggtc
aagcctctaaccagagtggagaagaatgagaacctgcaggcatggttcagggagatctct
aagcagatagagtctctgaactatgaggactccaccgctgcaggcaggaagaccgttcag
ttgatacaggcccttgtagaggttcaagagttccaccagttggagtccaacctgcaggtg
tgtcagtttctggctgacaccaggaagttccttcaccagatgatcaggaccataaacatc
aaggaggaggtcctgatcaccatgcagatagtaggagacctgtcctatgcatggcagatc
atagacagcttcacatccatcatgcaggagagtatcagagcgaacccatccatggtgacc
aaactacgagccacctttctaaagttggcgtctgcgttggacctgcctctgctgcgtatc
aaccaggctaacagtccagacctgctcagtgtttctcagttctactctggggagctggtg
acctacgtcagaaaggtgttacagatcatccctgagagcatgttcacctccctggctaag
atcatcaagctgcagatccatgccatcatggaggttcccaccagactggacaaggacaag
ctgaaggactacgctcagctgggggctcgctacgaggttgccaaactcacccacgccatc
tccatctttactgaagggattctgatgatgaagactacactggttggaatcatcaaggtg
gatcccaagcagctcctggaagatggtatcaggaaggagttggtgaggagagtagcctat
gctctacacaaaggacttatctttaaccccaaggctaagaccagtgagctgatgccgaag
ctcaaggagatggcagccaccatggatgggttctaccggtcctttgagtacatccaggac
tatgtctccatctacggcctgaagatctggcaggaggaggtctctcgcatcatcaactac
aacgtggagcaggagtgcaacagcttcctacgcaccaagatccaggattgggagagtgtc
taccagtcgacccatatacccatccccaagttcccctcggtcgatgagtcagccaccttc
atagggcgactctgtagagagatcctccgcatcacagaccccaaagtgacatgctacgtg
gaccagttgaacacctggtacgacctgaagacccaccaggaggtgaccaacaaccgtctg
ttttctgagatacaggacaccctggggaccttcggcctcaacgggctggacaggctgctc
tgcttcatgatcgtcaaggaactgcagaacttcctgacggtgcttcagaagaccatcctg
agggacaaggctatggtggacgtctttaaagccatgctgagcgctgtcaatcccgtcaaa
ggtattgtgggaaatgccagtaaagtctacaccaacgctgttgccaaaacacagaagatc
tgggggccatacttggaatcgatcatgaaggttggtcagatgcagatcctgaggcaacag
atagccaacgagctgaactactcctgcaagtttgactccaaacacctcgctgctgcactg
gaaaacctcaacaagtctctactggctgatatagaagcccactaccaggaccccagcctt
ccataccccaaggaggacaacaatctactgtatgagatcacagcctctctggaggcagca
ggcatacacaacccactcaacaagatctacattacaaccaagcgcctgccttactttcct
atcgtcaacttcctcttcatcttcgctcatctgcctaaactgcagtacagcaaaaatcaa
gggatgacgtgcaggaaagccacagacccggtagactggcctcctctggttctaggcctg
ctcactctgctcaagcagttccactccagatacacagagcacttcctggctctcattggg
caattcatacgctctatcatggaccagtgcaccagtcagaggatcccggacatgccgtct
gatgtggtgggagcactgatgtttctggaagattacgtacgctacaccaaactgcctcgc
aaggtggccgaggcccatgtgccaagtttcatctttgacgagttcaggacagtcctgtga
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