Coregonus clupeaformis (lake whitefish): 121585950
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Entry
121585950 CDS
T08357
Name
(RefSeq) protein SOGA3 isoform X1
KO
K27704
microtubule cross-linking factor
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121585950
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
121585950
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Gene cluster
GFIT
Motif
Pfam:
SOGA
Fez1
TSC22
Motif
Other DBs
NCBI-GeneID:
121585950
NCBI-ProteinID:
XP_045082030
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Position
17:14200236..14217098
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AA seq
850 aa
AA seq
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MNPASSGAADSRSQLDNSNRKQQQQRASSPAGGKDTGSKETPKSSTPSKSITSKQCGGGR
GSRVSSPVSTATSKDRQSSSSTGAASVAGAAPVQPGGAEIQTLSRAAAAAGSSRGAAEEG
SSQSEDSRCTDISCFKGDTTRVVSDQPCSSKSPKLKNNNPRGEGGGGASSTATGNKKSSS
KRSVGCGPGFWREGCLQSELIQFHLNKSLKKGGGKMQTKTLSPPEPVTEMAEPEDLTPEA
IVNEPEPVPEPDQLFQEEIEKLEDENDELKTEIEEMRVEMDEMRDTFYEEDACQLQDMRR
ELERANKNCRILQYRLRKAERKRMRFAQTGEVDGELLRALEQDLKVAKDVSVRLHHELEN
VEEKRTKTEEENEKLRQKLIEVEVTKQALHNQLEKAKELSLKRRGGRDVQKEKRIPQTPI
EEENEDLKCQLAFIKEEAVLMRKKMAKIDKEKDRLEHELQKYRSFYGDVDSPGPKGEAGG
PATSRESELKLRLRLVEEEANILGRKIVELEVENRGLKAELEDMRDRDEVAGGSAEHGCS
REQGEELRELRQQLQLVEDEAELLRRNLQDAEEDNNKVTGELNKLKYKEGSRHGAGGGAG
AAADRAKVEVLQEELKAARLQINELSGKVMQMQYENRVLLSNMQRYDLASHLGIRASPRE
SDAESDGGDDASTSSRFPPHRKREGPVGGESDSDEVRNIRCLTPTRSLYSPEGRFLPRSL
KDRQQMMDIRIEAERLGRTIDRLIADTSTIIAEARVYMVSNGELYEEEGSAVREHELLYR
INAQMKAFRKELQGFIDRLDVPKSEDKEDEEPLSMFQPIILLILLLLLFSSLSYTTIFKL
LFLFTLFFVL
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atgaaccctgcctcaagcggcgctgccgactcccgcagccagctagacaatagcaataga
aaacaacagcaacagcgagcttcctctccggctggcggcaaagacactggatctaaagag
acacctaaaagcagcactccgtcaaagagcatcacgtcaaagcagtgcggaggagggaga
ggcagccgcgtcagctccccggtctccacggcaaccagcaaagacagacagtcttcctct
tccacaggcgcggcaagcgtggcaggcgcggcccctgtccagcccggaggtgctgaaatc
cagacgttgagcagggcggcggcggcggctgggagcagcagaggagcggcagaggagggc
agtagtcagtctgaagactcgcgttgcactgacatatcgtgctttaagggggatacaaca
cgggttgtttctgatcagccttgttcatccaaatctcctaaattgaagaacaataacccg
agaggagagggaggaggaggagctagcagcacagcgaccggcaacaaaaagagctccagc
aagagaagtgtgggctgcggccctgggttctggagagagggatgtttgcagtctgagctg
atccagtttcacctgaataagagcttaaagaaaggaggaggcaagatgcagacgaagaca
ctgtctcccccggagcccgttacagaaatggcggaaccagaggatctcacccctgaggcc
atcgttaacgagcccgagccggtacctgagcctgaccagctatttcaggaggagatagag
aagctggaggatgaaaatgatgagctaaagactgagatagaggagatgagagtggagatg
gatgagatgagagacacgttctatgaagaggacgcgtgccagctgcaggacatgcgtcgc
gagctggagcgagccaataagaactgccggattctccagtaccgtctgaggaaggcggag
aggaagaggatgaggttcgcccagaccggagaggtagacggagagctactgagggccctg
gagcaggacttgaaggtagcgaaggatgtgtcagtgcgtctgcaccatgagttggagaac
gtggaggagaagaggacgaagacggaggaggagaacgagaagctgaggcaaaagctgata
gaggtggaggtgaccaagcaggccctgcacaaccagctggagaaggccaaggagctgtca
ctgaagagaagaggaggcagggatgttcagaaagagaaaaggattccacagaccccaata
gaggaggaaaatgaggatctgaaatgccagctggccttcatcaaggaggaagccgttttg
atgaggaagaagatggctaaaattgacaaggagaaggaccggctggaacacgagctgcag
aagtaccgctccttctacggggacgtggacagccctgggcccaagggagaggctggggga
ccagccacctcccgggagtcagagctgaaactgaggctgagactggtggaggaggaagcc
aacatcctggggaggaagattgtagagctggaggtggagaacagaggactgaaggctgaa
ctggaggacatgagagacagggatgaggtggctggaggctcggctgagcatggctgcagc
agggagcagggagaggaactcagggagctaaggcaacagctacagctggtggaagacgag
gcagagctacttaggaggaacctgcaggatgcagaggaggacaacaacaaggtgacggga
gagctaaacaagctaaagtacaaggagggctccaggcacggtgctggtggtggggccggg
gcagctgcggaccgggccaaggtggaggtcctgcaggaggagctaaaggctgccaggctg
cagatcaacgagctgagtggcaaggtgatgcagatgcagtatgagaaccgggtcctcctg
tccaacatgcagcgctatgacctggcatcacacctgggcatcagggccagcccccgggaa
agtgacgcagagagtgacggaggagatgacgcctccacctcatcacgcttcccaccccac
cgtaaacgcgaaggccccgtcggaggggagagcgactcggacgaggtgcgtaacatccgg
tgcctgacccccacccgctccctgtactcccccgagggccgcttcctcccccgcagcctg
aaggaccggcagcagatgatggacatccgtatagaagcagagcgactgggccggaccatc
gataggctgatagcagacaccagtaccatcatcgctgaggcccgggtctatatggtctcc
aacggggagctttatgaggaggaagggagcgccgtcagggagcatgagctgctgtacagg
atcaacgctcagatgaaggccttcaggaaggagctgcagggctttatagacagactggat
gtccccaagtcagaggacaaggaggatgaggaaccactgtctatgtttcaacccatcatt
ctgctgatcctcctcctcctcctgttctcctcactctcctataccaccatcttcaaactc
ctcttcctcttcacgctcttcttcgtcctgtaa
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