Coregonus clupeaformis (lake whitefish): 121586006
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Entry
121586006 CDS
T08357
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cclu03400
]
121586006
Enzymes [BR:
cclu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
121586006
DNA repair and recombination proteins [BR:
cclu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
121586006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
AAA_22
Helicase_PWI
Motif
Other DBs
NCBI-GeneID:
121586006
NCBI-ProteinID:
XP_045068949
LinkDB
All DBs
Position
Unknown
AA seq
2211 aa
AA seq
DB search
MSPPRLTGALRSFSTVSKHEDFTEEVYDLKTKRLKRQELFSREGLTWQKIVQFFTQHLEK
AEQQAAAQELKSILQAAKQIVGTEHGQDTIESAAVFLFETFHNKDHVGHEETRAIKQMFG
PFPSSAADASCAAVSRAVAPLGESQVEEFVRSQSACRTPQRGSAFGRNITFSYDCYALDP
QEALPWAGGPEDETPGGGLDFHSFLNNHQGRRGNGGEVDGGRLSPGGAQSSGDGTILRGE
VEKYLNGGNMISSSPEELCTSLFEMLASTKSDDELQNELFELLGPEGFEMISVLLQRRSS
IVDSLLSIPADRINYPPDGSRKGSGGEGSSKPTYGCQVSIQSGKEKEMMKIHRREEKRER
KRGERRWDDTESSSDLYFDPKEMRAQREQALLTARRSPVLSRERVYERIRYPNVYDCYAE
ATKTSAFVGGAKLMLPEGIKRENNKMYEEVEIPPSDPMPISFEEKPIYISELDEVGQLVF
KGMQRLNRIQSIVFETAYNTNENLLICAPTGAGKTNIAMLTVLHEIRQHLQPGGVIKKDE
FKIVYVAPMKALAAEMTNYFSKRLEPLGIAVKELTGDMQLTKGEILRTQMLVTTPEKWDV
VTRKSVGDVALSQIVKLLILDEVHLLHEDRGPVLECLVARTLRQVESSQSMIRILGLSAT
LPNYLDVASFLHVNPYIGLFYFDSRFRPVPLGQSFVGIKTTNKIQQLHDMEEVCYDKVLE
QIRNGHQVMVFVHARNATVRTAMGLIEMAKNRGESSFFQPDHGPDYGQCEKSIQRSRNKQ
MKEMFPDGFGIHHAGMLRADRSLMESMFSRGYLKVLCCTATLAWGVNLPAHAVIIKGTQI
YDAKRGTLVDLGILDVMQIFGRAGRPQFDKYGEGTIITAHDKLSHYLTLLTQQNPIESQF
LETMADNLNAEVSLGTVTNVEEAVRWLSYTYLYIRMRANPLAYGINHKAYQMDPGLELYR
KELVVMAARKLDKARMIRFEERTGYFASTDLGRTASHFYIKYNTMETFNELFNSQKTEAD
ILSIVSKAEEFEQVKVRDEEMEELEQMLCNYCELPAAGGVENGYGKINILLQTYIGRGEV
DSFSLISDLSYVAQNAARIVRALFEIALRKRWPAMTYRLLNLCKVIDKRLWGFAHPLRQF
SILPHNVLARLEEKKLTVDKLKDMQKDEIGHMLHHVNIGLKVKQCVHQIPSIQMEATIQP
ITRTVLRVRLQITPDFKWHDQCHGSVGEPWWLWVEDPINDHIYHSEYFLLQKKQVVSGEP
QQVVFTIPIFEPMPSQYYIRAVSDRWLGSEAVCIINFQHLILPERHPPHTELLDLQPLPI
TALGNPEYESLYKFTHFNPIQTQIFHTLYHTDTNVLLGAPTGSGKTIAAELAMFRVFNQY
PTSKVVYIAPLKALVRERIEDWKVRIEEKLGKKVVELTGDVTPDMRAIAAADLIVTTPEK
WDGVSRSWQNRSYVQKVAILIIDEIHLLGEDRGPVLEVIVSRTNFISSHTKKTVRVVGLS
TALANARDLADWLGIGQVGLFNFRPSVRPVPLEVHIHGFPGQHYCPRMASMNKPVFQGTE
THSKYSPPLRDSVTAACSATALDLIAFLATEDDPKQWLHQDETQMTDIIATVRESNLKLT
LAFGIGMHHAGLHERDRKTVEELFVNCKIQILIATSTLAWGVNFPAHLVIVKGTEYYDGK
TRRYVDYPITDVLQMMGRAGRPQYDDQGKAVILVHDIKKDFYKKFLYEPFPVESSLMGVL
SDHLNAEIAAGTITSKQDAMDYITWTYFFRRLVMNPSYYSLDDISHETVNKYLSNLVERS
LRDLECSYCMEIGEDDCTIEPLTYGRISSYYYLKHQTVRMFKERLRAELPIQDILSVLTD
AEEYGELPVRHNEDQLNSELAQRLPLQVNPHSYDSAHTKTHLLLQAHFSRAQLPCSDYGT
DTKTVLDNAIRICQAMLDVAANEGWLVTALSICNLVQMIVQGRWLNDSSILTLPTIEQQH
LYLFSRWSSKGGRGGARGFHGPIEGLPELIATCEGRENTFAAIVGEVLQPHQISQAWSFL
SHLPVMEVRLSVKGWWEGCGEQTERPLPAAGGKLRDDRSWLDVHADQEYVLQVSLQRINA
GQQRRKQDSKAQAPRFPKNKDEGWFLVLGEVERRELLAVKRIGYCRHRSTVSLAFYTPEK
TGKCIYTLYLMSDSYLGLDQQYDLHLNVTPACIAAQVNSEVTEAMGGMSFK
NT seq
6636 nt
NT seq
+upstream
nt +downstream
nt
atgtctccaccccggctcaccggcgccctgcgctccttctctactgtgagcaagcacgaa
gacttcactgaagaagtctatgatctgaagaccaagcgtctaaagaggcaggagctgttc
tccagagagggcctgacatggcagaagatagtccagttcttcactcagcatctggagaag
gcagagcagcaggctgcagcacaggagctgaagagcatcctacaggctgccaaacagata
gtggggacagagcatggccaggacaccattgagagtgctgctgtcttcctgtttgagact
ttccacaacaaggaccatgtgggtcatgaggagaccagggccattaagcagatgttcggc
ccgttcccctcctcggcagccgatgcctcctgtgctgctgtgtcccgggccgtggcccct
ctgggagagtcccaggtggaggagtttgttcgttcccagagcgcctgtcgcacccctcag
cgcggctcggccttcggacgcaacatcaccttctcctatgactgctacgccctggacccc
caggaggccctgccctgggccgggggccctgaggatgagacccctggtggaggcctggac
ttccacagcttcctcaacaaccaccaaggccgcaggggtaatgggggagaggtggatgga
ggcaggctaagcccgggaggggctcagagctctggggatgggaccatcctgaggggggag
gtggagaagtacctgaacggaggcaacatgatttcctccagccctgaagaactgtgcacc
tccctgtttgagatgctggcttccaccaagagtgacgacgagctgcagaacgagctgttt
gagctgctgggcccagagggatttgagatgatctctgttctcctccagagaaggtcttcc
atcgtggactctctcctctccatccctgcagacaggatcaactacccaccagatggtagt
cgtaaaggaagtggaggagaggggagcagcaagcccacgtacggctgtcaggtgtccatc
cagtcagggaaggagaaagaaatgatgaagatccaccggagggaggagaagagggagagg
aagaggggggagagacgctgggacgacaccgaatcctcctccgacctctactttgacccc
aaggagatgagagctcagagagagcaggccctgctgacagcacggcggtctccagtgctg
agcagagagagggtgtacgaacgcatccgataccccaacgtctatgactgctacgccgag
gccaccaagacctccgcctttgtagggggagccaagctgatgttaccagaggggataaag
agggagaacaataagatgtatgaagaggtggagattcctcctagtgatcccatgcccatc
agctttgaggagaaacccatctacatctctgaactggacgaggttggtcagttggtgttt
aaggggatgcagcgtctgaacaggatccagtccatagtgtttgagacagcctacaacacc
aatgagaacctgctcatctgtgcccccaccggggccggcaagaccaacatcgccatgctc
acagtcctccatgagatcagacagcacctccaacctggaggggtcatcaagaaggacgag
ttcaagatagtgtatgtagctcctatgaaggccctggcagcagagatgactaattacttc
agtaagcggttggagccactgggcattgctgtcaaagagctcactggagacatgcagcta
accaaaggggagatcctgcgtacacagatgctggtgactacccctgagaagtgggacgta
gtgacaaggaagagcgttggggacgtggccctgtcccagattgtaaagctcctcatcctg
gacgaggtgcatctgctacacgaggacagaggaccagttctggagtgcctggtggccagg
acactacgacaggtggagtcgagccagagtatgatccgtatcctgggtctgtcggccacg
ctgcccaactacctggacgtggcctccttcctccacgtcaacccctatatcggactcttc
tacttcgacagccgcttcagacccgtgcccctcggacagagcttcgtcggcatcaagacc
accaacaagattcagcagcttcatgacatggaggaggtttgctatgacaaggttctggag
cagatcagaaatggacatcaggtgatggtgtttgtccatgctcgtaacgccacggtgagg
acagccatggggctgatcgagatggccaagaaccgtggagagtcttccttcttccagcca
gaccatggacctgactatggccagtgtgagaaatcgatccaacgttccaggaacaagcag
atgaaggagatgttcccagatggttttgggatccaccacgctgggatgctgcgtgctgac
cgtagcctgatggagagcatgttctccaggggttacctcaaggttctgtgctgtaccgcc
acactggcctggggagtcaacctgcctgcacacgctgtcatcatcaagggcacccaaatc
tacgatgctaagcgtggtaccctggtggacctgggcatcctggacgtgatgcagatcttc
gggcgtgccgggcggccccagttcgacaagtacggcgagggcaccatcatcacggcacat
gacaagctgagccactatctcaccctgctcacccagcagaaccccatagagagccagttc
ctagagaccatggctgacaacctcaacgctgaggtgtcactagggactgtgactaacgtg
gaggaggcggtgaggtggctgagttacacctacctgtacatccgcatgagagccaacccg
ctggcctacgggatcaaccacaaggcctaccagatggacccaggtctggagctgtaccgt
aaggagctggtggtgatggcagccaggaagctggacaaggccaggatgatccgctttgag
gagaggacaggatacttcgcctccactgacctgggcagaaccgccagtcacttctacatc
aaatacaacaccatggagacgttcaacgagctgttcaactcccagaagacagaggctgac
atcctcagcatcgtctccaaggctgaggagtttgaacaggtcaaggtgcgtgatgaggag
atggaggagctagagcagatgctgtgtaactactgtgagctgcctgctgcaggcggagtg
gagaacggatacggcaagatcaacatactactgcagacctacatcggacggggagaggtg
gacagcttctccctcatctcagacctgtcctacgtagcacagaacgcagctcgtatcgtc
agggctctgtttgagattgctctgaggaagcgctggcctgccatgacctaccggctgctc
aacctgtgtaaagtgatagacaagcgtctgtggggcttcgctcaccccctgagacagttc
tccatcctgcctcacaacgtgctggctcgtctggaggagaagaaactcactgtggacaaa
ctgaaagacatgcagaaggacgagataggtcacatgctccatcacgtgaacatcgggttg
aaggtgaagcagtgtgtccaccagatcccttccatacagatggaggccaccatccaacca
atcacacgcaccgtgctcagggtccgcctccagatcacccccgacttcaagtggcacgat
cagtgtcatggttcagtgggagagccctggtggctgtgggtggaggaccccatcaacgat
cacatctaccactcagagtacttcctcctacagaagaaacaggtggtgagtggggagccc
caacaggtggtgttcaccatccccatctttgaacccatgccctcccagtactacatcaga
gctgtgtcagaccggtggctgggctcagaggctgtctgcatcattaacttccaacacctc
atcctgcctgagagacaccccccacacactgagctgctggacctgcagccgttgcccatc
accgccttggggaacccggagtacgagagtctgtacaagttcacccacttcaaccccatc
cagacacagatcttccacacgctctaccacaccgacaccaacgtcctgctgggggcgcca
acgggctccggtaaaaccatcgctgccgagttggccatgttccgagtcttcaaccagtac
cctacctccaaggtggtgtacattgcccctctgaaagctctggtcagggagaggatcgag
gactggaaggtcaggatagaggaaaaactggggaagaaggttgtggagctgacaggtgat
gtgactccagacatgcgggccatcgccgcggccgacctgatcgtgaccacgccagagaag
tgggacggcgtgagtcgctcctggcagaaccgcagctacgtccagaaagtagccatcctc
atcatcgacgagatccatctgctaggggaggacagaggtcctgtgctggaggtcatagtt
tccaggaccaacttcatctcctcccacaccaaaaagactgtccgcgttgtgggcctgtcc
acggccctggccaacgcacgagacctcgccgactggctagggattggacaggtgggtttg
tttaacttccggccatctgtgcgtcccgtcccattggaggttcacatccacggcttccca
ggacagcactattgcccccgcatggccagcatgaacaaacctgtgttccaaggtacagaa
acacacagtaagtattcaccccctctccgcgattcagtcactgcagcctgttctgcgaca
gctcttgacctgatagccttcctggccaccgaggacgaccccaaacagtggctgcaccag
gacgagactcagatgacagacatcatcgccacggtgagggagtccaacctgaagctgacg
ttggcgttcggtatcggcatgcaccacgctggactacacgagagagacaggaagactgtg
gaggaactgtttgtcaactgcaagatccagatactgatagccaccagcactctggcctgg
ggagtcaacttccctgcccatctggtcattgtcaaaggtactgagtactacgatgggaag
accagacgctacgtggactaccccatcacagacgtgctgcagatgatgggccgtgcaggc
cgccctcagtatgatgaccagggcaaagctgtgatcctggtccacgacatcaagaaagac
ttctacaagaagttcctctatgaacccttccctgttgagtccagtctcatgggtgtgctg
tcagaccatctgaatgctgagattgctgcagggaccatcacctctaaacaggacgctatg
gactacatcacctggacgtacttcttccgcaggctggtcatgaaccccagttactacagc
ctggatgacatcagccacgagaccgttaacaagtacctgtccaacctggtggagaggagt
ctccgagacctggagtgttcctactgtatggagataggagaggatgattgcacaattgag
cccctgacgtacggtcgtatctcctcctactactacctgaagcaccagacagtcaggatg
ttcaaggagaggctgagggctgagctgcccatccaggacatcctctctgtcctcacggat
gctgaggagtacggggagctgcccgtcaggcacaacgaggaccagctgaacagtgagctg
gctcagcgtctccccctgcaggtcaacccccacagctacgacagcgcccacaccaagaca
cacctgctgctgcaggcccatttcagccgcgcccagctgccctgctccgactacggcacc
gacaccaagaccgtgctggacaacgccatacgcatctgtcaggccatgctggacgtagca
gccaacgagggctggctggtgactgctctcagcatctgtaacctggtgcagatgatcgtt
cagggcaggtggctcaatgactcctctatactgaccctacctaccatagagcagcaacac
ctctacctgttcagcaggtggagctccaagggagggaggggcggagccaggggcttccac
ggaccaatagaagggctccctgagctgattgccacctgcgaggggcgggagaacaccttc
gctgccatcgtgggggaggtgcttcagccccatcagatctcccaggcctggtcattcctc
agccatctgccggtgatggaggtgcgtctgagtgtgaagggttggtgggagggatgtggg
gagcagacagagcgccccctccctgcggccggggggaagctcagggacgacagaagctgg
ctggatgtccacgctgaccaggagtacgtcctgcaagtctcactgcagcgcatcaacgct
ggccagcagaggaggaagcaggacagtaaggcccaggcccccaggttccctaagaataag
gatgagggctggttcctggttctaggagaggtggagcgcagagagctactggccgtcaaa
cgcattggatactgccgacaccgcagcaccgtttccctggccttctacacccccgagaag
accggaaagtgtatctacacgctatacttgatgagtgacagttacctgggtctggaccag
cagtatgacctccacctcaacgtgacccctgcctgcatcgctgcccaggtcaacagtgaa
gtcactgaggccatgggaggcatgtccttcaagtga
DBGET
integrated database retrieval system
