Coregonus clupeaformis (lake whitefish): 121586023
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Entry
121586023 CDS
T08357
Name
(RefSeq) LIM domain-containing protein 1-like
KO
K16682
LIM domain-containing protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121586023
03036 Chromosome and associated proteins [BR:
cclu03036
]
121586023
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
121586023
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Sister chromatid separation proteins
Aurora kinases
Regulators of Aurora kinases
121586023
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
121586023
NCBI-ProteinID:
XP_041758375
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Position
17:complement(23704376..23739122)
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AA seq
661 aa
AA seq
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MDKYDDLDLEASKFLEDLNMYEASRDGLFRMKRDAGNNSDFEETRRVFASKMTKIHIQKQ
QEEIAKNNLAVRMNGGHNRATDSTFYTKDRPPINSYRQAGEAAAKPPILSGPMPGTVSGA
SQYAPCDALKHHSPSQQAYGYGNNYDNKERFEPHSYHHALSPGNAHTHGSGHPASPSGTW
ASYSSRGGQASPGSSSPGGSSGLMCSSSQQPQHRSPSPSFSDSLPSPSPTRLHQSKAATP
LVRQSPPTVADAGAAADWMRSLGNPDLIAPLPLSAFTGGADLYQQLSPQPAHVTPPTGPY
SAAHSMAPRPTTNQGNLCQNGLSQSPVAVPSPAQPKATAGAYLPASASPSGTSVSRSFGQ
GQGVGQAQGRQVAMGVDVPSALDSQLSSGGEACQLQPQSQYEAPSPPRALKLPCQTLHVQ
PEQGPSAAEIKLEALTKRLEKEMDAQPKADYFGSCVKCNKAVYGATQACQAMGSLYHDVC
FTCSACSRRLRGKAFYYVGGKVFCEEDFLYSGFQQSADKCNACGHLIMDMILQALGKSYH
PGCFRCVICNDSLDGVPFTVDTENKIYCVKDYHRVLAPKCAACNQPILPSEGSDETIRVV
SMDKDYHVECYHCEDCQMELNDEEGHRCYPLDGHLLCHACHLKHIEPGCASPTAASYQHQ
F
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggataaatacgacgatttggatcttgaggcaagtaagtttttagaagacctcaatatg
tatgaggcatctagggacgggttgttccgaatgaagagggatgcagggaacaactccgac
tttgaagaaaccaggagagtttttgcctccaaaatgacaaaaatccacatacagaaacag
caagaggaaattgccaaaaacaatttggcagtgagaatgaacgggggtcacaacagagcg
acagacagcacgttttacaccaaagacaggccgcctatcaatagctacagacaggcagga
gaagctgctgccaagcctcccatactctctggccctatgccaggcaccgtcagtggcgcg
agtcagtacgcgccctgtgacgctctgaaacaccattcacccagtcaacaggcatacggc
tacggaaacaattatgataacaaggagcgttttgagccgcattcttaccaccacgccttg
agccctgggaacgcacacacacatggctctggtcaccctgccagtccctcgggcacttgg
gcctcctactcctccaggggtggccaggcctccccaggatcctccagccctggtggatca
tcaggccttatgtgcagctcatctcagcagccccaacaccgctcaccatctccctccttc
tccgacagcctaccatctccaagccccactagactgcaccagagcaaggctgccacccca
ctagtgcggcagagtccccccacggtggctgatgctggggctgcagcagactggatgcgg
agcttggggaacccagacctgatagcaccgctccctctgagtgccttcactggcggagct
gacctgtaccagcagctgtctccccaacctgcccatgttacaccgccaacaggcccttac
tctgcagcacactccatggccccaagaccaaccaccaaccagggaaatctatgccagaac
gggctctctcagagtcctgtggctgtcccatccccagcccagcccaaagccaccgctggg
gcttaccttcctgcctctgcctctccctctggaaccagtgtctctagaagctttggccag
ggtcaaggtgtaggccaggcccagggcaggcaagtggccatgggggtggatgtgccctct
gccctagacagccagctgtcctctggtggtgaggcctgccagctccagccccagtcccag
tatgaagcccccagcccccccagagctctcaaactgccctgccagactctccatgtccaa
ccggagcaggggccgtctgccgctgagatcaaattagaagccctgaccaagcgtctagag
aaggaaatggacgcccagccaaaggcagactacttcgggagctgtgtgaagtgtaacaag
gcggtgtacggagccactcaggcctgccaggctatgggaagcctctatcatgatgtctgc
ttcacctgcagcgcctgcagcagaaggctacgggggaaagcattttactacgtcggtggg
aaggtgttctgtgaagaggactttctgtattctggattccagcagtctgcagacaagtgt
aacgcatgcggacatctgatcatggacatgatcctgcaggcccttgggaagtcctaccac
cctggctgtttccgttgtgtcatctgcaacgacagtctggacggagtgcccttcactgtg
gacacagagaacaagatttactgtgtcaaagactaccacagggtcttggcccccaaatgt
gcagcatgtaaccagcccatcctgccttcagagggctctgatgaaaccatccgagtggta
tccatggataaagactaccacgtagagtgctatcactgtgaggactgtcagatggagctg
aatgacgaggaggggcaccgctgctacccgctagacggccacctcctctgccacgcctgc
cacctgaagcacatcgagccgggctgcgcctcgcccaccgctgcctcctaccagcaccag
ttctag
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