Coregonus clupeaformis (lake whitefish): 121586108
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Entry
121586108 CDS
T08357
Name
(RefSeq) gamma-aminobutyric acid receptor subunit pi
KO
K05189
gamma-aminobutyric acid receptor subunit pi
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04080
Neuroactive ligand-receptor interaction
cclu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121586108
04082 Neuroactive ligand signaling
121586108
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121586108
Ion channels [BR:
cclu04040
]
Ligand-gated channels
GABA-A
121586108
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
121586108
NCBI-ProteinID:
XP_041758534
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Position
2:complement(14078409..14084468)
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AA seq
450 aa
AA seq
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MIPTHPLTFLTLGLVLTQSGCMLRGGHDWGDWNGSQLHPTIQKLMKGYNRYLRPNFNDGP
VEIGISLDIASIDAISEINMDYTATIFLRQRWRDSRLVFPGNESVSVDGRLVSLLWIPDT
FIPDSKRSFLHDVTMENRLIRIFSNGTVLYALRITATIACNMDLTKYPMDRQVCTLQLES
WGYNLEDVIFYWTRGNDSVKGLDTLRLAQYSVESYYTSVSEAVYETGLYPKLVLHFALRR
NVLFFILETYAPSTLLVVLSWVSFWISQSSVPARTCIGVTTVLTMTTLMMGARTSLPNAN
CFIKAIDVYLGICFTFIFGALLEYACAHFCTMQHQTIRDIHRELLQEFDDSNGNGSMPMV
SSSQPNQVLELGSTQNEPVDQLGMSVSEAEATEKKPGKGCGLTSVKNTSRRAVSVFSVEN
PHNIDRHARTVFPLTFLAVNVFYWLYYLFI
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgatacctacccaccctttgaccttcctgaccctgggcctggtcctaactcagagtgga
tgtatgctccgtgggggtcacgactggggagactggaatggctcccagctgcatcccacc
atccagaaactaatgaagggatataaccgctacctgaggcccaacttcaatgacggccct
gttgagattgggattagtctggatatcgccagcattgatgccatctcagaaatcaatatg
gactacacagccactatcttcttgcgtcagcgttggagggactcccggctggtgttccca
ggaaatgagagtgtgagtgtggatggacgactagtctccctcctctggatcccagacacc
ttcattccagactccaaacgctccttcctgcatgacgtcaccatggagaaccgtctcata
cggatcttcagcaacgggaccgttctctatgctctacgaataacagcgaccatcgcctgt
aacatggacctgaccaagtacccaatggacagacaggtgtgcaccctgcagctggagagt
tggggatataacctagaggatgtaatattctactggactagagggaatgactcagtgaaa
ggtctggacacactgcgtctggcccagtacagtgttgagagttactacacatctgtttct
gaggccgtctatgagacagggctgtacccgaagctggtgctccactttgctctgcgtagg
aacgtgttgttcttcatcctggagacatacgccccttctactctgttggtggtgctctcc
tgggtctccttctggatcagccaatcatctgtccccgcacgcacctgcatcggtgtgacc
acagtgctgactatgactactctgatgatgggtgcccgtacctctctccccaacgccaac
tgtttcatcaaggccatagacgtgtacctgggcatctgtttcaccttcatctttggggcg
ctgctggagtacgcctgcgcccacttctgtaccatgcagcaccaaaccataagagacata
cacagggagctccttcaggagtttgatgactccaacggaaacggttccatgcccatggtc
agctccagccaaccaaatcaggtcctggagctaggctccacccaaaatgagcctgttgac
caattggggatgagtgtcagcgaggccgaggctacagagaagaagccggggaaggggtgt
ggcctgacgtcggttaagaacacgtcgcgtcgtgcggtgtctgtgtttagtgtagagaac
cctcacaacatcgaccgccacgctcgcaccgtgttccccctcaccttcctggctgttaat
gtcttctactggctctactacctcttcatctaa
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