Coregonus clupeaformis (lake whitefish): 121586113
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Entry
121586113 CDS
T08357
Name
(RefSeq) protein SMG9
KO
K18735
protein SMG9
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121586113
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
121586113
BRITE hierarchy
Motif
Pfam:
Smg8_Smg9
ABC_tran
AAA_16
AAA_30
AAA_18
Motif
Other DBs
NCBI-GeneID:
121586113
NCBI-ProteinID:
XP_041758539
LinkDB
All DBs
Position
Unknown
AA seq
507 aa
AA seq
DB search
MSESGHSQPGMYGQGRRRRRRRDRDVGPLGQNLSGPSRDREYVPRERRDGSEEPPGPLVQ
KTPIILAKPPGERSKPSQSVPISGGQALEKPIMLIKTREDGVKPGTPPEVALPASGSGAS
KLEREGQRPTQPVYQIQNRGMGAAASSGAVDPVIGQTKLVPPEKMKHSIKLVDDQMNWCD
SAMEYLRDQTDMLVVGVIGLQGTGKSTIMSLLSANTPEEDQRGYVFRAQTQEIKERGGNQ
STGIDFYITQERVIFLDTQPILSPSILDHLINNDRKLPPEYNLPHTYVEMQSLQITAFLF
TVCHVVIVIQDWFTDINLYRFLQTAEMLKPSTPSASHDSTGSSGNEEGSEYYPHIVFLQN
KSSRDEFCPRNLKKMHMAVDKLMSHSHLKYKGTLSMLDCNIFPGLGRDYLETEVNMFLLP
LMENEGEDALTKAGSGAAPLFSLLPGYRGHPTFSSQVSKLRSQILAMSRCQLSHTILTEK
NWFHYAARIWDGVKKSSALSEYSRLQA
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaatccggccacagtcaacccggcatgtacggacagggaaggaggagaaggcga
cgccgagacagggatgtgggtcccctggggcaaaacctctctggtcccagtcgagatcgg
gaatatgttcccagagaacgcagggatggcagtgaggagcctccaggaccactcgttcag
aagacacccatcatactggccaaaccccctggagaacggtccaagccttcccagagtgta
cccatcagcggaggccaggccctggagaagcccatcatgctcatcaagaccagggaggac
ggggtgaaaccagggaccccccctgaggtggctcttccggcctctggctctggggcctca
aagctggagagggagggccagcgccctacccaacctgtctaccagatacaaaacagaggc
atgggagcagctgcttccagcggtgctgtggaccctgtgattggccagaccaagctcgtc
ccccctgagaagatgaagcacagcatcaagctggtggacgatcagatgaactggtgtgac
agcgccatggagtacctaagggatcagacagacatgttggtagtgggagtcattggcctg
cagggaacagggaaatccaccatcatgtctctcctgtctgccaacacacctgaagaagac
caaaggggctatgtgttcagggcccagactcaggagatcaaagagagaggggggaaccag
agcactggtattgacttctacatcactcaggaaagagtcatcttcttggacacacagccc
attctcagcccctccattttggatcacctcatcaacaacgaccgcaagctgcctccagag
tacaacctccctcacacctatgtggagatgcagtctcttcagatcactgccttcttgttc
acagtgtgccacgtggtcattgtgattcaagactggttcactgatatcaacctctacagg
ttcctccagacagcagagatgctgaagccgtccaccccctcagccagccacgacagcact
ggctcctctggcaacgaagagggatcagagtactaccctcacatagtgttcctgcagaac
aaatctagtcgagatgagttctgtcccagaaacctgaagaagatgcacatggcagtggac
aagctgatgtcccactcccatctgaaatacaaaggcactttgtccatgctggactgtaat
attttccctggactgggccgggactacctggaaacagaggtcaacatgttcctgctgccc
ctcatggagaatgagggggaggacgcgctaaccaaagcagggtctggggccgcccctctc
ttctctctcctcccggggtacagaggacaccccaccttctcctctcaggtctccaagctc
cgcagccaaatcctggccatgtcccgctgtcagttgtcacacaccatcctcacagagaag
aactggtttcactacgcagctcgcatctgggacggggtaaagaagtcctcagccctgtct
gaatacagccgtctacaggcctag
DBGET
integrated database retrieval system