Coregonus clupeaformis (lake whitefish): 121586188
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Entry
121586188 CDS
T08357
Symbol
ldb3b
Name
(RefSeq) LIM domain-binding protein 3b
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121586188 (ldb3b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
121586188 (ldb3b)
Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
121586188 (ldb3b)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
121586188
NCBI-ProteinID:
XP_041758761
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Position
1:complement(12285054..12326003)
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AA seq
295 aa
AA seq
DB search
MATAYTVTLGGSAPWGFRLQGGKDFNMPLSICRITPGTKAAGGSLVQGDIIASINGLSTE
GMTHLEAQNKIKIASNKLTLTMQKSKRPVPIPMATPRMDSPMPVIPHQKIITNTAGNQEY
VPNFNPIALKDSALSTHKPIEVRGPGGKGTIVHAQYNTPISMYSQDAIMDAIAGQSQSKG
REGDVPAGSPLAGSLPVKAPVVDSASPVYQAVIQPHDRDEEMAEWARRAANLQSKSFRIL
AHLTGTEYMQDPDEEALQRSRDKFESEVKGPRFQKLKNWHNGLSAGILNVPETPF
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggctactgcgtacacagtaactctcggtggctccgcaccatggggcttcagactacaa
ggaggaaaggacttcaatatgccactaagcatctgcaggataactccaggcactaaggct
gcagggggcagtctagtccagggtgacatcattgcatcgataaacggcctcagtacagag
ggcatgacgcacctggaggcacagaacaagattaagatcgcttccaataaactgaccctc
accatgcagaagtcgaaacgtcccgtccctattcccatggcaacacccagaatggactcc
cccatgccagttatccctcaccaaaagatcattacgaacacggctggaaatcaggagtat
gtgcccaactttaaccccatagctctgaaggactcggctctgtctacccataaacccatc
gaggtgcgcggcccgggaggcaagggcactatcgtccacgctcagtacaacacccctata
tccatgtactcacaggacgccatcatggacgctattgccggacagtcacagtccaagggc
cgtgagggtgatgtacctgctggctcccccctggctggttccctgcctgtgaaggcccca
gtggttgacagtgcgtctccagtctaccaggctgtgatccagccacatgacagagacgag
gagatggccgagtgggccagacgggctgccaacctgcagtccaagagcttcaggatcctg
gcccacctcaccggcaccgaatacatgcaagacccagatgaggaggccctgcagaggtca
agggataagtttgagtcggaagtgaaaggacctcgcttccagaagctgaagaactggcac
aacgggctctcagctgggatcctcaatgtccccgagactcccttctaa
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