Coregonus clupeaformis (lake whitefish): 121586217
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Entry
121586217 CDS
T08357
Name
(RefSeq) probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cclu03009
]
121586217
Enzymes [BR:
cclu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
121586217
Ribosome biogenesis [BR:
cclu03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
121586217
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
Methyltransf_31
PCMT
FtsJ
DUF3439
Motif
Other DBs
NCBI-GeneID:
121586217
NCBI-ProteinID:
XP_041758677
LinkDB
All DBs
Position
Unknown
AA seq
744 aa
AA seq
DB search
MGRKLDPTTYVKKGPGRKSRKQKGAETELAKFLTDEDTAPKRLSSRSRKRAGKRAQVTKK
PKETIEKEEPKKGFTDENSEWLKPAKRKREVGQSDDEDDSDSQWEQEEDEGQEGGEKNKG
KKLLIEGDDDEDLVDDYGALEDNSEGEGEGDGDGAELLPIERAARKQKKLQEAMGQESDD
DDYKGKSGDEDMDEDDTVQANIDEMDKFILPGAEEIAKEGVLLVDLQTIHQRIKDNVDVL
SHFATKREEGKERTEYLSLLKKDLSTYYSYNNFLIDKLLDIFPVSELIDFLEANEIQRPV
TIRTNTLKTRRRDLAQALINRGVNLDPLGKWSKVGLVIFDSSVPIGATPEYLAGHYMLQG
ASSFLPVMALSPQEGETVLDMSSAPGGKTTYMAQLMRNTGVIVANDASADRLKSVVGNIH
RLGVTNSVICNYDGRQFPKVMGGFDRVLLDAPCSGTGVIAKDPAVKTSKDESDIQRSAHL
QKELILAAIDSVNAESPSGGYLVYCTCSIMVEENEWVVDYALKKRNVKLVQTGLDFGKEG
FTRFKERRFHPSLKLSRRFYPHSHNMDGFFVAKLKKFSNTVPTTAVDKDGEEETEPSEAV
EVTADSSDEDRPSKAGSKNKSKKQKPVPGKPADSQKATANGKPAKSIVKKTTNPSTLKKS
EKPTGTKKAKFAKMDGETVKVDGELKKSNTVKTEGETTKESKEGSRFEKKGDKQRKSPMQ
SKKRIGKNKFNKLKKLLKKEEVGQ
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgggcaggaagttggatcccaccacttatgtgaagaaggggccggggcggaagtccagg
aagcagaaaggagcagagactgagctggccaagttcttaacggatgaggatactgcacca
aaacgactgtcaagcaggtccaggaaaagagctgggaagcgagctcaggtgaccaaaaag
cccaaggaaaccattgagaaggaggagccaaaaaaaggattcacagatgaaaacagtgaa
tggctgaagccagcaaagaggaagcgtgaggtcggccaatcagatgacgaggatgacagt
gacagccaatgggagcaggaagaggacgagggacaagagggaggggagaagaataaaggg
aaaaaactgctaattgagggagatgatgatgaagacctggttgatgactacggtgcattg
gaggacaacagtgaaggagagggggaaggagacggtgatggagcggagctgctccccatc
gagcgagctgccaggaagcagaagaagctgcaggaagccatgggccaggagagtgatgat
gatgattataaggggaagagtggagatgaagacatggatgaagatgacacggtacaggct
aatatagatgagatggacaaattcatactacctggtgcagaggagatagcaaaagagggc
gttttgcttgtagacctgcagaccatccaccagagaataaaggacaacgtggacgttctc
tctcactttgccaccaagagggaggaggggaaagagagaacagagtacctctctctcctg
aaaaaggatctttccacttactacagctacaacaatttcctcatagacaaactgctggat
atcttcccagtgtcagagctgattgatttcctggaggccaatgaaattcagcgacctgtc
accattcggaccaatacactgaagacgaggaggagggacttggctcaggccctgatcaac
agaggggtgaatctggatcctctggggaagtggtctaaagtgggcctggtcatcttcgac
tcctcagtacccataggtgcgaccccggagtacctggctggtcactacatgctgcaggga
gcctctagtttcctgcctgtcatggctctctctccccaggagggggagacggtgctcgac
atgagctcagctccagggggaaagaccacctatatggcccagttgatgaggaacacaggg
gtgattgtggccaatgatgccagtgctgacagattgaagagtgtggtgggcaacatccac
cgtctgggagtcaccaactcagtgatctgtaactacgacggcaggcagttccctaaggtc
atgggtgggtttgacagagtgctgcttgatgctccctgctcaggcacaggagtaatcgcc
aaagaccctgctgttaagaccagtaaggacgagtctgacatccagcggtcggcccacctg
cagaaggagctcatcctggcggccatcgactctgtcaacgctgagtctccctctggaggc
tatctggtgtactgcacatgctctatcatggtggaggagaacgagtgggtagtggactat
gctctcaagaaaagaaacgtcaaactcgtccagactggactggactttggcaaagaaggc
ttcaccagattcaaagagagacgattccatccctctctgaaactctcacgccggttctac
cctcattcccacaacatggacggtttctttgtggccaagctgaaaaagttctccaacaca
gtcccaaccacagcagttgacaaagacggagaagaggaaaccgagccatctgaggcagta
gaggttacagctgattcctctgatgaggacagaccatctaaagcagggtctaagaacaag
tccaagaagcagaagccagtccctggcaagccagctgactcacagaaggcaacagccaac
gggaaaccagccaaaagcatcgtcaagaaaacaacaaacccaagcaccctgaaaaaaagt
gaaaaaccaactgggacgaaaaaagcaaaattcgcaaagatggatggtgagactgtgaaa
gtggacggagagctcaagaagtccaacacagtcaaaacagaaggggagacgactaaagag
tcaaaggaagggagcaggtttgagaaaaagggcgataaacagaggaaatcccccatgcag
agcaagaagagaattgggaagaacaaattcaataagttgaagaagctgctgaaaaaagaa
gaggttggacaatga
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