Coregonus clupeaformis (lake whitefish): 121586242
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Entry
121586242 CDS
T08357
Name
(RefSeq) C-C chemokine receptor type 4-like
KO
K04179
C-C chemokine receptor type 4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
121586242
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cclu04030
]
121586242
04050 Cytokine receptors [BR:
cclu04050
]
121586242
04090 CD molecules [BR:
cclu04090
]
121586242
G protein-coupled receptors [BR:
cclu04030
]
Rhodopsin family
Chemokine
CC Chemokine
121586242
Cytokine receptors [BR:
cclu04050
]
Chemokine receptors
CC Chemokine
121586242
CD molecules [BR:
cclu04090
]
Proteins
121586242
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7TM_GPCR_Srw
MASE10
DUF1345
ABHD16_N
Motif
Other DBs
NCBI-GeneID:
121586242
NCBI-ProteinID:
XP_041758716
LinkDB
All DBs
Position
17:complement(29087956..29089140)
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AA seq
346 aa
AA seq
DB search
MNTTEATSKDYYYDYYGDMKSPCSTGTSLTRGTNYQPILFYLVFTLGLTGNSMVLWVLLK
YMKLKTMTDICLLNLALSDLLLALSLPLWAYNAQGHEFEGDSPCKIMAGVYQVGFYSSIL
FVTLMSVDRYLAIVHAVAAMRARTLRYGALACVIVWVASIAAALPEVIFAAMVKENDEES
GSSCQRIYPEDTEKTWKLFRNFGENGVGLILCLPIMVFCYISILTVLQRLRNSKKDRAMK
LIFAIVVVFIVSWVPYNVVVFLRTLQMFDIGNSCEVSTQVDTAMEVTETIALAHCCVNPV
IYAFVGEKFRKCLGTVLSRYPLCKKLSKHAMGSSRASENETSNTPV
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgaacacaaccgaggccaccagcaaagactattactatgactattatggcgacatgaag
agcccctgtagcactggcaccagtctaacccgagggaccaactaccagcccattctcttc
tacctggtgttcaccctgggtctgacaggcaacagtatggtgctctgggtcctcctcaag
tacatgaaactgaagaccatgacagacatctgtctgctgaacctagccctatctgacctg
ctcctcgccctctctctgcctctctgggcctacaacgcccagggtcatgagtttgaaggg
gacagtccgtgtaagatcatggctggtgtctaccaggtgggcttctacagcagcatcctg
tttgtgaccctgatgagtgtggatcgctacctggccattgttcacgccgtggccgccatg
agggccaggacgctgcgttatggagcgctggcgtgcgtcatcgtctgggtagcgtccatt
gccgctgctctccctgaggtcatcttcgcagcgatggtgaaggagaatgacgaggagagt
ggttcaagttgccagcggatttacccagaagacacagagaagacatggaagttgttccgg
aactttggtgaaaacggagtgggactcatcctatgtctgcccataatggtattttgttac
atcagtattctcactgtactacagaggttaaggaactccaaaaaagacagggccatgaaa
ctgatattcgccatcgtggttgtgtttatagtctcctgggtcccttacaatgttgtggtt
ttcctccggacccttcagatgtttgacattgggaatagctgtgaggtttcaacacaggtt
gatacagctatggaggtgacagagaccatagcgctggctcactgctgtgtcaacccagtc
atctacgcttttgtaggagagaaattcagaaagtgtttgggcactgtgctctctagatat
ccattgtgtaaaaagctcagcaaacatgcaatggggagcagcagagcttcagaaaacgag
acttctaacacacctgtgtga
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