Coregonus clupeaformis (lake whitefish): 121586264
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Entry
121586264 CDS
T08357
Symbol
fbxl6
Name
(RefSeq) F-box/LRR-repeat protein 6 isoform X1
KO
K10272
F-box and leucine-rich repeat protein 6
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121586264 (fbxl6)
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
121586264 (fbxl6)
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Gene cluster
GFIT
Motif
Pfam:
F-box-like
LRR_At5g56370
LRR_6
F-box
LRR_At1g61320_AtMIF1
zf-CCCH_Mcm10
Motif
Other DBs
NCBI-GeneID:
121586264
NCBI-ProteinID:
XP_045082215
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Position
17:complement(32685590..32722929)
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AA seq
560 aa
AA seq
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MEDGTPVGLSVGIADADNAPSSSSGASTRKRKSDVLRNAKPKKKTKPKVSRPPRLGYTVE
QGEDMLLIISNTNQYDNIWRPNAKRKKKKKILKGKAKVTQAKKKNTVFPKGKATKKPLIK
RGELEPTLQHHQDEGFDSWGQSLPVEVLVNIFKMVVHQDGAVPFLCRVARVCHLWNAAAA
SPALWRSVSVGYCWLEPGKTHLPKTELKIRNTVSWLAQNRFSQLRDFSLNHWKNNVDHVV
EVVSQSCPQLRSLKLSYCTGVTEKAFQSLSGSCRSLDSINVQYSEFQVEGLVTFLESYGI
QIRQILFTHGPRNDRLLTAISRGCCPELQLLEINTKLDSGNCHLPICIQALQNGCPKLQT
FRMLNVIPMPKMTRNGSGSTSGFPLLEELCMATTAVSFMTDQDLAKIVYDSPKLRVLDLR
GCSRITAAGLSSLPCDELECLYWGLYFSSNVTVSLSKKGIHLLTQKWSGTLQELDLANQL
FSEEDMEIALGHLAQGTGADPIRSLNLSGTKVTTPALRLVIGQSTALNYLNLSSCRYLPR
GLKKLYRGQEEIHQLLDKLE
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggaagatggtacacctgtaggactatctgtgggaattgcagacgctgacaatgctccc
tcaagctcatcaggagcatcaacaagaaagaggaagtctgatgtgctcagaaatgctaag
cccaagaagaaaacgaagcccaaagtcagccgccccccaaggcttggctacactgttgaa
cagggagaggatatgcttctgatcatatcgaatacaaatcagtatgataacatatggcgg
ccgaacgcgaaaagaaaaaagaaaaagaaaatccttaaaggaaaagccaaagtcactcag
gcaaagaagaagaatacagtttttccaaagggtaaagccacaaagaagccactgatcaag
agaggtgaactggagcccacactgcaacaccaccaagatgagggctttgacagctggggt
cagagtttaccagtggaagtgttagttaatattttcaagatggtagttcaccaagatggt
gcagtaccattcctgtgcagggtggctagggtgtgccacctatggaatgctgctgcagcc
agtcctgctctgtggcgcagtgtgtccgtgggttactgctggttggaacctggtaaaacc
cacttacctaaaacagaactgaagatcaggaacactgtaagctggcttgcacagaacaga
ttctcccaactaagagacttttctcttaatcactggaaaaataatgttgaccatgttgtg
gaggttgtgtcccagtcctgcccccaactccgatcactcaagctgtcatactgtacaggc
gtgactgagaaggcctttcagagcctcagtggcagctgtcggtcactggatagcattaat
gtccagtactctgagtttcaggttgaagggcttgtcaccttcttggaatcatatggcatt
caaattagacagattttgttcacccatgggcccaggaatgaccggcttctcactgctatc
tctagaggatgctgcccagagttgcaattgctggaaatcaacacaaagctggacagtgga
aattgccatcttccaatctgcattcaagctttgcaaaatggctgtcctaaactgcagact
ttccggatgctgaatgtcattccgatgcctaaaatgactcgtaatgggtcgggttccaca
tctggcttccctttactggaggagctgtgtatggccaccacagctgtttccttcatgact
gaccaagacttggcaaagattgtctacgactcccctaaactgcgtgtgctggacctgaga
ggttgttcccggatcacagcagccgggctctcttctctaccatgtgacgagcttgagtgt
ctgtactggggactgtactttagcagcaatgtcacagtatcgttgtccaagaagggaatt
cacctgctgacccagaaatggagtggcaccttgcaggagctagaccttgccaaccagctc
ttctctgaagaggacatggagattgccttgggccatctagctcagggaaccggagcagac
cccatacgttctctcaatcttagtgggaccaaggtcacaacacctgccctccggttagtt
ataggccagtctacagcactcaattacttaaacttgtcgtcctgccgttaccttccaaga
ggtctgaagaaactgtatcgtggccaagaagaaattcaccagctgctggacaaattagag
taa
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