Coregonus clupeaformis (lake whitefish): 121586271
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Entry
121586271 CDS
T08357
Name
(RefSeq) zinc finger and BTB domain-containing protein 22 isoform X1
KO
K10502
zinc finger and BTB domain-containing protein 22
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121586271
04121 Ubiquitin system [BR:
cclu04121
]
121586271
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
121586271
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
121586271
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTB
zf-H2C2_2
zf-C2H2
zf-C2H2_jaz
zf-C2H2_4
DUF5810
zf-Di19
BTB_KLHL33
C2CH-4th_BIRD-IDD
BTB_BTBDG
Motif
Other DBs
NCBI-GeneID:
121586271
NCBI-ProteinID:
XP_041758781
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Position
17:complement(33216598..33230078)
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AA seq
715 aa
AA seq
DB search
MDHGCIVSGAPAGPVVQVCFPSVRAAVLDSLNRQREEGRLCDLSIQVQGQVFRAHRCVLA
ASSPYFHDQVLLKNVTTVSLPSVMDPVAFESVLSSAYTGQLSIVRDDIVNYVTVASFLQM
WHIVDKCTEILKRPRPLAECNPGDVAAGTHHGASSRQQSPSSTDCLYMEREGKEKEKRTY
GQEQNALPPLATWRRPHQFPRWGHPRPSPQPAISMPVQHLADSQLDSHPAGESDYSSCEE
VWMSSHSKASPLGHHDGRGLDHSHTRHGGFPGEALRLRPRLRQRAAPPSAEKLHGRDRGS
GEGFGEEPQEKRGTERGIEANEGMGEELEEEKREGPERRGHSVDFHTSVHQGEEGGQPEG
RKSSGELQKKEERQLGRCSALTSPHAGEPDEVIPGPSCSAPTPSTQMQWQASPWSQQVAR
PQAGEEDYRREDDKEDDEEEVDFGRFADGAFRRETYDEIEDGTGQVSQRPLVPACPDDND
FVLGAPELNWPNGANMTHGGGTPTPTSSCHLSPSPAPFPPSSSPPIPSSSSSVSLAGAPY
TGKVHFCHCGKAYTLKSMRDRHVKMQHLNLRPFACPVCAKSFKMKHHLTKHLKTHGGLRP
YECGLCGKKVIWRDSFLRHQARCERLAASYDGAAASSNTTEAADMDDGYAYGFEEGEVYF
SQGGQVKVEQADFQGEAESGMSALLGGEVGAEIGSQSRTVVSHSFKEEASDRFSS
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggatcacggctgcattgtctctggtgctcctgctggcccggtggtccaagtatgtttc
cccagtgtgcgtgcagcagttttggacagcctgaatcgacagcgggaggagggccggctc
tgtgacctttcaatccaggtgcagggacaggtgttcagggcccaccgctgtgtgctggct
gcctcctcgccatactttcatgatcaggtgttgctgaagaatgtgacgacagtttctctg
ccctctgtcatggaccctgtggcctttgaaagtgtcctgagttcagcctacaccggccaa
ctgagcatagtgcgtgatgacattgtcaactacgtgacggtagccagctttctccagatg
tggcatatagttgacaaatgcacagagatcctgaagagacctcgacctctagcagaatgc
aaccctggggatgttgcagctggcacacaccatggtgcctcctcaaggcagcagtcccca
agcagcactgactgcctatacatggagagagaggggaaagagaaggagaagaggacctac
ggccaggagcagaatgctctgcctccattggccacgtggaggaggccccatcagttcccc
aggtggggccaccccaggccctcaccccagccagccatttccatgcctgtccagcaccta
gctgactcacagctggactcccaccctgctggggagagtgactactccagctgtgaggag
gtgtggatgtccagccacagcaaagccagccccctaggacatcatgatgggagaggactg
gaccatagccacaccaggcatggggggtttcctggtgaggcattgagactgagacctaga
ctgagacagagggcagcaccaccaagtgctgagaaactgcatggcagggatagaggaagt
ggagagggctttggagaagagcctcaggagaagagggggactgaaagagggattgaagca
aatgaaggaatgggagaagagttggaagaggagaagagggagggtcctgagcggagagga
cactctgtagacttccacactagtgtacaccaaggtgaggagggaggacagccagagggg
agaaagagctcaggggagctgcagaagaaagaggagagacagttggggagatgctcagcc
ctgacttctccccatgctggggaaccagatgaggtgattcctggaccctcctgctcagct
cctacaccatcgacccaaatgcagtggcaggccagtccctggtctcagcaagtagctagg
ccgcaagctggagaggaagactacagaagagaagacgacaaagaagatgacgaggaggaa
gtggactttggccgatttgcggatggtgcctttcgaagggaaacctatgatgagattgag
gatggcaccggacaggtttctcagagacccttagtacctgcctgtcctgatgacaatgac
tttgtcctgggggccccagagttgaactggcccaatggggcaaacatgacccatggtggt
ggtaccccaacccccacctccagctgccacctgtccccatcccctgctccattcccccct
tcctcctcaccccccatcccatcttcctcctcgtccgtctcccttgccggggccccttac
acaggaaaagtgcacttctgccactgtgggaaggcctacacactgaagagtatgcgcgac
cgccacgtcaagatgcagcacctcaacctgcggcccttcgcttgccccgtgtgcgccaag
agcttcaagatgaagcaccacctgaccaagcacctgaagacccacggcgggctgcggccc
tatgagtgtggcctgtgtgggaagaaggtcatctggagggacagtttcctgcgccaccag
gcccgctgtgagagactggccgccagctatgatggagccgctgccagtagtaacaccaca
gaggccgctgacatggatgatggttatgcctatgggttcgaggagggggaggtttatttt
tcacagggtgggcaggtgaaagtggagcaggcagactttcaaggggaggcagagtctggg
atgagtgcgttgttagggggtgaggttggggctgaaataggctctcagtcaaggactgtg
gttagtcacagctttaaggaggaagccagtgacaggtttagtagctga
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