Coregonus clupeaformis (lake whitefish): 121586276
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Entry
121586276 CDS
T08357
Symbol
ago3b
Name
(RefSeq) protein argonaute-3
KO
K11593
eukaryotic translation initiation factor 2C
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121586276 (ago3b)
03036 Chromosome and associated proteins [BR:
cclu03036
]
121586276 (ago3b)
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
121586276 (ago3b)
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
121586276 (ago3b)
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
121586276 (ago3b)
microRNA pathway
RISC loading complex
121586276 (ago3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoMid
PAZ
ArgoN
ArgoL1
ArgoL2
Motif
Other DBs
NCBI-GeneID:
121586276
NCBI-ProteinID:
XP_041758789
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All DBs
Position
17:complement(33408144..33442184)
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AA seq
878 aa
AA seq
DB search
MEIGTSGDVGAQALFSVPRRPGFGTMGKPIKLLANCFQVDIPKMDVYLYEVDIKPEKCPR
RVNREVVDSMVKHFKVTIFGDRRPVYDGKRSLYTANPLPVATAGVDLDVTLPGDGGKDRP
FKVSIKFVSLVSWHMLHEVLTGRTMPEPLELDKPISTNPVHAVDVVLRHLPSMKYTPVGR
SFFSSPEGYDHPLGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPMIQFMCEVLD
IHNIDEQPRPLTDSHRVKFTKEIKGLKVEVTHCGTMRRKYRVCNVTRRPTSHQTFPLQLE
NGQTVERTVAQYFREKYSLQLKYPHLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDN
QTSTMIKATARSAPDRQEEISRLVRSANYEVDPFVQEFQFRVRDEMAQVTGRVLPAPGLQ
YGGRVSSEQFMPQQMNPAVSLQNRTVATPSHGVWDMRGKQFHTGVEIKMWAIACFATQRQ
CREEILKGFTDQLRKISKDAGMPIQGQPCFCKYAQGSDSVEPMFRHLKNTYTGLQLIIVI
LPGKTPVYAEVKRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKINVKLGGINNILVPH
QRPSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDAHPSRYCATVRVQRPRQEVIQD
LASMVRELLIQFYKSTRYKPTRIIFYRDGVSEGQFRQVLYYELLAIREACIMLEKEYQPG
ITYIVVQKRHHTRLFCADRNERVGRSGNIPAGTTVDTDITHPYEFDFYLCSHAGIQGTSR
PSHYHVLWDDNCFTADEFQLLTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRARYHLVDKE
HDSAEGSHVSGQSNGRDPTALAKAVQIHHDTLRTMYFA
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcggaacttcaggagatgttggggcccaggccctgttctcagttccgcggcgg
cctggctttggcaccatggggaagcctatcaagctgctggccaactgtttccaggtggat
atccccaagatggacgtctacctctatgaggtagacatcaagcccgagaagtgcccgcgt
cgcgtcaacagggaggtggtggactccatggtgaagcacttcaaggtgaccatctttggg
gaccgaaggccagtctacgatgggaagaggagcctctacacagccaaccccctaccagtc
gccacagcaggggtggatctggacgtcaccctgccaggggacggcggtaaggatcgcccc
ttcaaagtgtccatcaagtttgtgtcgctagtcagctggcacatgctgcacgaggtcctg
acggggcgcaccatgcctgagcccttggagctggacaagcccatcagcaccaaccctgta
cacgctgtcgacgtggtgctgcgacacctgccctccatgaagtataccccagtggggcgc
tccttcttctcctccccagagggttatgaccaccccctgggcgggggcagggaggtgtgg
ttcggcttccaccagtcggtgcggcccgccatgtggaagatgatgctcaacattgacgta
tcggccacggcgttctacaaggcccagccgatgatccagttcatgtgtgaggtcctggac
atccacaacatagacgagcagccccggcccctcaccgactcccacagggtcaagttcacc
aaagagatcaaaggtctgaaggtggaagtgacccactgcgggacgatgcggaggaagtac
agagtgtgtaacgtgacccgccgccctaccagccaccagacgttccccctgcagctggag
aatggtcagacagtggagcgcacggtggcccagtacttcagagagaagtacagcctgcag
ctgaagtacccccacctcccctgcctccaggtgggccaggagcagaaacacacctacctg
cccctggaggtgtgcaacatagtagctggccagcgctgtattaaaaaactcactgataac
cagacgtccaccatgatcaaagccacggcccgctctgccccagacagacaggaggagatc
agcaggctggtgcgtagtgcgaactatgaggtggacccgttcgtccaggagttccagttc
cgcgtgcgtgacgagatggctcaggtgacgggccgtgtgctgccagcccccgggctgcag
tacggcggcagggtgagctcggaacagttcatgccccagcagatgaaccctgcggtgtcg
ttgcagaaccgcacggtggccacacccagccacggcgtgtgggacatgaggggcaaacag
ttccacaccggggtggagatcaagatgtgggccatcgcctgcttcgccacgcagaggcag
tgtcgcgaggagatcctcaagggtttcactgaccagctgcgtaagatctctaaggatgct
gggatgcccatccagggccagccatgtttctgtaaatacgcccagggatcggacagtgtg
gagcccatgttcaggcacctgaagaacacctacactggcctgcagctcatcatcgtcatc
ctgcctgggaagacccctgtctatgctgaggtgaagcgggttggagacactctcctgggc
atggccactcagtgtgtccaggtgaagaacgtggtgaagacgtccccccagaccctctcc
aacctctgcctcaagatcaacgtcaaactggggggcatcaacaacatcctggtgccacac
caacgtccctcagtgttccagcagcctgttatcttcctgggggccgacgtcactcaccct
ccagccggagacggaaagaagccatccatcgccgcggtggtgggcagtatggacgcccac
cccagcaggtactgtgccaccgtgagggtccagagacccagacaggaggtgatccaggac
ctggcctccatggtgcgggagctcctcatccagttctataagtccacccgctacaaaccc
accagaataatattttacagggatggcgtgtcagagggtcagttcagacaggtgctgtac
tatgagctgctggccatcagggaagcctgtatcatgttggagaaggagtaccagccaggc
atcacctacatcgtggtgcagaaacgccaccacacacgcctcttctgtgccgaccgcaac
gagcgggttggacgaagtggtaacattcctgcaggcaccactgtggacacagacatcact
cacccctatgagtttgacttttacctctgcagccacgcaggaatacagggtacgagccga
ccatcccactaccacgtcctgtgggacgacaactgcttcactgctgacgagttccagctg
ctcacctaccagctgtgccacacctatgtccgctgcacccgctcggtctccatccccgcg
ccagcctactacgcccacctggtggccttccgcgcccgctaccacctggtggacaaagaa
catgacagtgcggagggcagccacgtctcggggcagagtaacggccgagaccccacggcc
ctcgccaaggctgttcagattcatcacgacacactgaggaccatgtatttcgcctga
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