Coregonus clupeaformis (lake whitefish): 121586308
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Entry
121586308 CDS
T08357
Name
(RefSeq) ephrin-A1
KO
K05462
ephrin-A
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121586308
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cclu04052
]
121586308
00536 Glycosaminoglycan binding proteins [BR:
cclu00536
]
121586308
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cclu00537
]
121586308
Cytokines and neuropeptides [BR:
cclu04052
]
Cytokines
Growth factors (RTK binding)
121586308
Glycosaminoglycan binding proteins [BR:
cclu00536
]
Heparan sulfate / Heparin
Axon guidance molecules
121586308
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cclu00537
]
Others
121586308
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ephrin
Motif
Other DBs
NCBI-GeneID:
121586308
NCBI-ProteinID:
XP_041758835
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All DBs
Position
17:35164173..35178043
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AA seq
223 aa
AA seq
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MDLVWSLCFVGSLCAWFASAERHSVYWNRTNTKFLWDDYAVEVRLNDYLDIVCPHYPLGE
VASQDAERYVLYMVEREDYDACKPQSYDQMRWECGHPFAPHAAEKFSEKFQRFTPFTLGK
EFRQGESYYYISKPLHHHGQECLRLRVDVVAADGSQEARVATGGAAPGAGGGAHNASNRL
PADDPVVILPEVQKSVRTNLAVSTASFSILSLMVPVLLLLLLQ
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atggatttggtctggagcctgtgcttcgttgggagtctctgcgcttggtttgcatctgca
gaaaggcacagcgtatattggaatagaacaaacaccaagttcctatgggacgactatgcg
gtggaggtgcggctgaatgactacctggacattgtgtgcccccactacccgctgggcgag
gtggcatcgcaggacgctgagcgctacgtgctctacatggtggagcgggaggactacgac
gcttgcaagcctcagtcctatgaccagatgcgctgggagtgcggccaccccttcgcaccc
cacgccgccgagaagttctcagagaagttccagcgtttcacccccttcaccctgggcaag
gagttccgccagggagagagctactactatatctccaaacctctgcaccaccacggacag
gagtgcctcaggctcagggtagacgtcgtagctgctgatggttctcaagaggccagggtt
gcaactggaggagctgcacctggagctgggggtggagcacacaacgcctctaacagactg
cctgcagatgacccagtggtaatcctgccagaggtccagaaaagcgtgcggacaaatttg
gcagtctcgacagcgtccttctccatcctctcattgatggtaccagtcttattattactg
ttgttacagtga
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