KEGG   Coregonus clupeaformis (lake whitefish): 121586308
Entry
121586308         CDS       T08357                                 
Name
(RefSeq) ephrin-A1
  KO
K05462  ephrin-A
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04010  MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    121586308
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:cclu04052]
    121586308
   00536 Glycosaminoglycan binding proteins [BR:cclu00536]
    121586308
   00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:cclu00537]
    121586308
Cytokines and neuropeptides [BR:cclu04052]
 Cytokines
  Growth factors (RTK binding)
   121586308
Glycosaminoglycan binding proteins [BR:cclu00536]
 Heparan sulfate / Heparin
  Axon guidance molecules
   121586308
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:cclu00537]
 Others
  121586308
SSDB
Motif
Pfam: Ephrin
Other DBs
NCBI-GeneID: 121586308
NCBI-ProteinID: XP_041758835
LinkDB
Position
17:35164173..35178043
AA seq 223 aa
MDLVWSLCFVGSLCAWFASAERHSVYWNRTNTKFLWDDYAVEVRLNDYLDIVCPHYPLGE
VASQDAERYVLYMVEREDYDACKPQSYDQMRWECGHPFAPHAAEKFSEKFQRFTPFTLGK
EFRQGESYYYISKPLHHHGQECLRLRVDVVAADGSQEARVATGGAAPGAGGGAHNASNRL
PADDPVVILPEVQKSVRTNLAVSTASFSILSLMVPVLLLLLLQ
NT seq 672 nt   +upstreamnt  +downstreamnt
atggatttggtctggagcctgtgcttcgttgggagtctctgcgcttggtttgcatctgca
gaaaggcacagcgtatattggaatagaacaaacaccaagttcctatgggacgactatgcg
gtggaggtgcggctgaatgactacctggacattgtgtgcccccactacccgctgggcgag
gtggcatcgcaggacgctgagcgctacgtgctctacatggtggagcgggaggactacgac
gcttgcaagcctcagtcctatgaccagatgcgctgggagtgcggccaccccttcgcaccc
cacgccgccgagaagttctcagagaagttccagcgtttcacccccttcaccctgggcaag
gagttccgccagggagagagctactactatatctccaaacctctgcaccaccacggacag
gagtgcctcaggctcagggtagacgtcgtagctgctgatggttctcaagaggccagggtt
gcaactggaggagctgcacctggagctgggggtggagcacacaacgcctctaacagactg
cctgcagatgacccagtggtaatcctgccagaggtccagaaaagcgtgcggacaaatttg
gcagtctcgacagcgtccttctccatcctctcattgatggtaccagtcttattattactg
ttgttacagtga

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